RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 OR51F2Q8NH61 342 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 SYNPRQ8TBG9 265 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 LRRC37BQ96QE4 947 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 C1orf198Q9H425 327 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 HINT3Q9NQE9 182 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 GRIP1Q9Y3R0 1128 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 CDC14BO60729 498 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 GZMMP51124 257 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 SELENOVP59797 346 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 CCL8P80075 99 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 RPL18Q07020 188 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 NRN1LQ496H8 165 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 INTS11Q5TA45 600 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 RBM15BQ8NDT2 890 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 SEMA6DQ8NFY4 1073 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 PFN4Q8NHR9 129 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF519Q8TB69 540 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 SNX33Q8WV41 574 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 ASB10Q8WXI3 467 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 SEPHS2Q99611 448 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 MRPL13Q9BYD1 178 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 GPR160Q9UJ42 338 aa17.74■□□□□ 0.43
TRAPPC3-208ENST00000616074 MCIDASD6RGH6 385 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 MMP7P09237 267 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF84P51523 738 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 UGT2B15P54855 530 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 UCP2P55851 309 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 VMACQ2NL98 169 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 TMEM154Q6P9G4 183 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 CCDC80Q76M96 950 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 NKAIN4Q8IVV8 208 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 LRRC18Q8N456 261 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 SYT14Q8NB59 555 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 ICA1LQ8NDH6 482 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 OR1J2Q8NGS2 313 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 TSPEARQ8WU66 669 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 RASSF5Q8WWW0 418 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 C11orf40Q8WZ69 217 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 GTF3AQ92664 365 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 INTS9Q9NV88 658 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 SLCO1C1Q9NYB5 712 aa17.73■□□□□ 0.43
TRAPPC3-208ENST00000616074 IQCMA0A1B0GVH7 501 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 A0A1W2PRG6 482 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 TRMUO75648 421 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 OR7A10O76100 309 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 PTHP01270 115 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 MT-ND1P03886 318 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 FUT1P19526 365 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 TNFRSF1BP20333 461 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 RAD52P43351 418 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 GLO1Q04760 184 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 PCGF3Q3KNV8 242 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 AVPI1Q5T686 147 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 SHQ1Q6PI26 577 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 THSD4Q6ZMP0 1018 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 TMEM255BQ8WV15 326 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 BCL2L14Q9BZR8 327 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 NANOGQ9H9S0 305 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 C20orf141Q9NUB4 165 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 SH3GLB1Q9Y371 365 aa17.72■□□□□ 0.43
TRAPPC3-208ENST00000616074 A0A0A6YYJ9 748 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 CENPBD1B2RD01 187 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 FBP2O00757 339 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 SLC2A10O95528 541 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 ACADSP16219 412 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 AQP2P41181 271 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF133P52736 654 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 MVKQ03426 396 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 PLP2Q04941 152 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 C10orf128Q5T292 105 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 FAHD2BQ6P2I3 314 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 CPEB3Q8NE35 698 aaKnown RBP17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 FAHD2AQ96GK7 314 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 MAGEB18Q96M61 343 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 LRMDAQ9H2I8 198 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF665Q9H7R5 613 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 NPHS2Q9NP85 383 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 INIPQ9NRY2 104 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 NKIRAS2Q9NYR9 191 aa17.71■□□□□ 0.43
TRAPPC3-208ENST00000616074 TRAV20A0A0B4J274 112 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 IGHV1-69-2A0A0G2JMI3 117 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 RGS9O75916 674 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 PNPP00491 289 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 VIMP08670 466 aaKnown RBP17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 CDAP32320 146 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 APLNRP35414 380 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 RBM34P42696 430 aaKnown RBP17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 CRYBB2P43320 205 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 DAP3P51398 398 aaKnown RBP17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 TAS2R41P59536 307 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 HSF2Q03933 536 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 MMEL1Q495T6 779 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 RABL3Q5HYI8 236 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 PABPC1L2AQ5JQF8 200 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 ARMC4Q5T2S8 1044 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 NANOGP8Q6NSW7 305 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 C12orf54Q6X4T0 127 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 HDDC2Q7Z4H3 204 aa17.7■□□□□ 0.42
TRAPPC3-208ENST00000616074 OR1J1Q8NGS3 322 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms