RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CDSNQ15517 529 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 HIST3H3Q16695 136 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 NXNL2Q5VZ03 156 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 FAM205BPQ63HN1 556 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 VWA1Q6PCB0 445 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SLC25A47Q6Q0C1 308 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 CHMP1BQ7LBR1 199 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SHFQ7M4L6 423 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 AAED1Q7RTV5 226 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 C20orf196Q8IYI0 205 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 OR6V1Q8N148 313 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 NAXEQ8NCW5 288 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 BPIFB6Q8NFQ5 453 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 MBD3L2Q8NHZ7 208 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SMAP2Q8WU79 429 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 HTRA1Q92743 480 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 GGHQ92820 318 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 WNT2BQ93097 391 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 OTULINQ96BN8 352 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 ZMYND19Q96E35 227 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 ZNF837Q96EG3 531 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SLC25A44Q96H78 314 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 ADAD1Q96M93 576 aaKnown RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SIGLEC11Q96RL6 698 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 ALG12Q9BV10 488 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 OR51V1Q9H2C8 321 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 CALHM2Q9HA72 323 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 SRA1Q9HD15 236 aaKnown RBP7.1□□□□□ -1.27
PCDH9-205ENST00000614931 FKBP14Q9NWM8 211 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 CLN6Q9NWW5 311 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 KLHL9Q9P2J3 617 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 PSORS1C1Q9UIG5 152 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 RCE1Q9Y256 329 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 UNC79Q9P2D8 2635 aa7.1□□□□□ -1.27
PCDH9-205ENST00000614931 NAV2Q8IVL1 2488 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TVP23AA6NH52 213 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 PRODHO43272 600 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 MPZL2O60487 215 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 SLC16A7O60669 478 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 WDR1O75083 606 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 CLDN14O95500 239 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 IGHV3-9P01782 118 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 IGHG1P01857 330 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TFP02787 698 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 LYNP07948 512 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 RPSAP08865 295 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 CCDC159P0C7I6 412 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 GAAP10253 952 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 FCGR2AP12318 317 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 PAICSP22234 425 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 KIR2DL2P43627 348 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 CSNK1A1P48729 337 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 ZNF133P52736 654 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 CLRN1P58418 232 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 SIRPAP78324 504 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 SLC35A2P78381 396 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 KLHL12Q53G59 568 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 RBM48Q5RL73 367 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TSPO2Q5TGU0 170 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 MEDAGQ5VYS4 303 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 GTF2IRD2BQ6EKJ0 949 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 LRFN4Q6PJG9 635 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 B3GNT6Q6ZMB0 384 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 MEPCEQ7L2J0 689 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 GTF2IRD2Q86UP8 949 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 ZBTB46Q86UZ6 589 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 GID4Q8IVV7 300 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 NSMAFQ92636 917 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 INTS12Q96CB8 462 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 LGALS12Q96DT0 336 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 RNFT2Q96EX2 444 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 ALKBH3Q96Q83 286 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 NR1H4Q96RI1 486 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TEX12Q9BXU0 123 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TP63Q9H3D4 680 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 RERGLQ9H628 205 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 ZNF696Q9H7X3 374 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 SLC7A10Q9NS82 523 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 PLCXD1Q9NUJ7 323 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 MRPL22Q9NWU5 206 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 TAS2R16Q9NYV7 291 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 GLTPQ9NZD2 209 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 ERVK-18Q9QC07 812 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 PRSS50Q9UI38 385 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 B9D1Q9UPM9 204 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 NOSIPQ9Y314 301 aaKnown RBP7.09□□□□□ -1.27
PCDH9-205ENST00000614931 UGT2A1Q9Y4X1 527 aa7.09□□□□□ -1.27
PCDH9-205ENST00000614931 RTTNQ86VV8 2226 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 SH3D21A4FU49 640 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 ZNF726A6NNF4 738 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 M0R3G1 203 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 GPR171O14626 319 aa7.08□□□□□ -1.28
PCDH9-205ENST00000614931 AKAP8O43823 692 aaKnown RBP7.08□□□□□ -1.28
PCDH9-205ENST00000614931 SELENOFO60613 162 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms