RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TMIGD3P0DMS9 266 aaPredicted RBP9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 PSMB1P20618 241 aaKnown RBP9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 BTG2P78543 158 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SEZ6L2Q6UXD5 910 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 TMUB2Q71RG4 321 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF441Q8N8Z8 693 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF721Q8TF20 911 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SLC38A3Q99624 504 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 CRB3Q9BUF7 120 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 PRO3102Q9H379 93 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SCPEP1Q9HB40 452 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 LRIT1Q9P2V4 623 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 FARSAQ9Y285 508 aaKnown RBP9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 TMEM184BQ9Y519 407 aaPredicted RBP9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SLCO1B1Q9Y6L6 691 aa9.85□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 TRBV2A0A0J9YWF9 115 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 A0A1B0GTH9 108 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 CREBL2O60519 120 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 EIF4E2O60573 245 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 GLCEO94923 617 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 HIST1H1CP16403 213 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 KCNJ3P48549 501 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 HLXQ14774 488 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 RBMS2Q15434 407 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF74Q16587 644 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 NDUFAF6Q330K2 333 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SCGB2B2Q4G0G5 96 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 DCAF12L2Q5VW00 463 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 OR4C3Q8NH37 302 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 OR56B4Q8NH76 319 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SLC41A2Q96JW4 573 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 TGIF2Q9GZN2 237 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 HRASLSQ9HDD0 168 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 PLEKHA6Q9Y2H5 1048 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 MRPS17Q9Y2R5 130 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 IGHV5-51A0A0C4DH38 117 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 UBE2QL1A1L167 161 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 GSTZ1O43708 216 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 PRKNO60260 465 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 DDAH2O95865 285 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 RPL4P36578 427 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 C1orf61Q13536 156 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ELAVL1Q15717 326 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 SMAD2Q15796 467 aaKnown RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 NNATQ16517 81 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF542PQ5EBM4 170 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 TMEM69Q5SWH9 247 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 LINC01590Q5TEZ4 76 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 B3GNTL1Q67FW5 361 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 WDR74Q6RFH5 385 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 C10orf53Q8N6V4 93 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 LCORQ96JN0 433 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF75AQ96N20 296 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 LMAN1LQ9HAT1 526 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 ZNF230Q9UIE0 474 aaPredicted RBP9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 CEP192Q8TEP8 1941 aa9.84□□□□□ -0.83
SENP3-EIF4A1-201ENST00000614237 PNLIPP16233 465 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 S100A11P31949 105 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SCAND1P57086 179 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RPS15P62841 145 aaKnown RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 GSG1LQ6UXU4 331 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 STK35Q8TDR2 534 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CASTOR1Q8WTX7 329 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ACTR6Q9GZN1 396 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TSPAN10Q9H1Z9 355 aaPredicted RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MCIDASD6RGH6 385 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PYCARD-AS1I3L0S3 204 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TSPAN2O60636 221 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SULT1A3P0DMM9 295 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SULT1A4P0DMN0 295 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PVALBP20472 110 aaPredicted RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZP3P21754 424 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MNDAP41218 407 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CCR9P51686 369 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 LUMP51884 338 aaPredicted RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SIRPAP78324 504 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 HSD11B2P80365 405 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 FGL1Q08830 312 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RBM39Q14498 530 aaKnown RBP9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PON3Q15166 354 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SWI5Q1ZZU3 235 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 DEFB110Q30KQ9 67 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SHEQ5VZ18 495 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RAB12Q6IQ22 244 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 POMZP3Q6PJE2 187 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SLC35F2Q8IXU6 374 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PLPP5Q8NEB5 264 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR11G2Q8NGC1 345 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PELI1Q96FA3 418 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TREM1Q9NP99 234 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CUTCQ9NTM9 273 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MED11Q9P086 117 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PCDHGA5Q9Y5G8 931 aa9.83□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SUSD5O60279 629 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms