RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RIPPLY2Q5TAB7 128 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 RGMBQ6NW40 437 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 C15orf39Q6ZRI6 1047 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 TMEM106AQ96A25 262 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 TNRC6CQ9HCJ0 1690 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 DCDC2BA2VCK2 349 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SLC6A1P30531 599 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 DHODHQ02127 395 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZNF429Q86V71 674 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CAPNS2Q96L46 248 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PADI1Q9ULC6 663 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PCBP4P57723 403 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 CLEC1AQ8NC01 280 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZNF583Q96ND8 569 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ANGPTL4Q9BY76 406 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 TTTY10Q9BZA0 68 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 Q9N2K0 584 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 MANBALQ9NQG1 85 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SRPK3Q9UPE1 567 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ALPK2Q86TB3 2170 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 MPTX1A8MV57 137 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 M0R2Z0 102 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CLEC3AO75596 197 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZNF547Q8IVP9 402 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CMTM2Q8TAZ6 248 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 HMGB4Q8WW32 186 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SYT11Q9BT88 431 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZNF443Q9Y2A4 671 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 GPX2P18283 190 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 AHRP35869 848 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 INHBEP58166 350 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 GAB1Q13480 694 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PRAMEF18Q5VWM3 479 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 TMEM225Q6GV28 225 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 RANBP10Q6VN20 620 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 DGAT2L6Q6ZPD8 337 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 GKN2Q86XP6 184 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CSNK1A1LQ8N752 337 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 OR4B1Q8NGF8 309 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 MBOAT4Q96T53 435 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 JAM3Q9BX67 310 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 NOX4Q9NPH5 578 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 UQCC1Q9NVA1 299 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ELOVL2Q9NXB9 296 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 METTL1Q9UBP6 276 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 ROBO1Q9Y6N7 1651 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 FAM24AA6NFZ4 105 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 FAM227AF5H4B4 570 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PPM1DO15297 605 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PIN1Q13526 163 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 FAHD1Q6P587 224 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ZNF66Q6ZN08 573 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 C20orf24Q9BUV8 137 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 HRASLSQ9HDD0 168 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PDHXO00330 501 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 OR4E1P0C645 316 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
TTC28-208ENST00000612946 RPS18P62269 152 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 ABHD12BQ7Z5M8 362 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 C9orf62Q8N4C0 152 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ZNF384Q8TF68 577 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 RIMS4Q9H426 269 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 KCNK6Q9Y257 313 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 POM121BA6NF01 834 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 MFNGO00587 321 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ACHEP22303 614 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SHC2P98077 582 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 CACNA1BQ00975 2339 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SLC10A2Q12908 348 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 DTX3Q8N9I9 347 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SLC38A9Q8NBW4 561 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 IER3IP1Q9Y5U9 82 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 NDUFB6O95139 128 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 PLCXD2Q0VAA5 305 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 FAM109BQ6ICB4 259 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 MMP21Q8N119 569 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 UBXN10Q96LJ8 280 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 ABHD6Q9BV23 337 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 A0A087WUU8 490 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 RD3LP0DJH9 198 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 KRTDAPP60985 99 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 DCAF7P61962 342 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 BAXQ07812 192 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 WDR74Q6RFH5 385 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 OR51A4Q8NGJ6 313 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SENP5Q96HI0 755 aaPredicted RBP8.11□□□□□ -1.11
TTC28-208ENST00000612946 FCGR2CP31995 323 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 MTCP1P56278 107 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 EXT1Q16394 746 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 SYPL2Q5VXT5 272 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 GPR137Q96N19 417 aa8.11□□□□□ -1.11
TTC28-208ENST00000612946 DPH7Q9BTV6 452 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms