RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 IGKV3-11P04433 115 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 ADRA2CP18825 462 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 CFPP27918 469 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 RORAP35398 523 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 MAGEB1P43366 347 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 SLC6A8P48029 635 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 MTFR2Q6P444 385 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 TEX261Q6UWH6 196 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 LRRN1Q6UXK5 716 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 DNM1P46Q6ZS02 220 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 LRRTM1Q86UE6 522 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 SYNPRQ8TBG9 265 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 ZNF524Q96C55 264 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 KTI12Q96EK9 354 aaPredicted RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 MS4A3Q96HJ5 214 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 AIFM2Q9BRQ8 373 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 WDR76Q9H967 626 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 ZNF346Q9UL40 294 aaKnown RBP13.28□□□□□ -0.28
CDH1-213ENST00000612417 TMEM14AQ9Y6G1 99 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 U3KQ87 197 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
CDH1-213ENST00000612417 A0A087WV48 116 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 IGKV3D-11A0A0A0MRZ8 115 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 TRBV5-7A0A0A0MS05 114 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ANKRD20A5PA0PJZ0 165 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 OR4C45A6NMZ5 311 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 D6RAR5 112 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ZNF254O75437 659 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 RPP14O95059 124 aaKnown RBP13.27□□□□□ -0.28
CDH1-213ENST00000612417 F13BP05160 661 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ALOX5APP20292 161 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 OR3A3P47888 321 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ZP1P60852 638 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 TMEM255AQ5JRV8 349 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 TMEM69Q5SWH9 247 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 LURAP1LQ8IV03 231 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 DND1Q8IYX4 353 aaKnown RBP13.27□□□□□ -0.28
CDH1-213ENST00000612417 OR6V1Q8N148 313 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ZNF321PQ8N8H1 164 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 RHBDD1Q8TEB9 315 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 ADIPOR1Q96A54 375 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 RADILQ96JH8 1075 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 KLHL15Q96M94 604 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 UTP23Q9BRU9 249 aaKnown RBP13.27□□□□□ -0.28
CDH1-213ENST00000612417 B3GNT4Q9C0J1 378 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 HEXA-AS1Q9H8Q6 139 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 OCIAD1Q9NX40 245 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 LAMP5Q9UJQ1 280 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.28
CDH1-213ENST00000612417 TMEM212A6NML5 194 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 ACOT7O00154 380 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 PHYHO14832 338 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 SSNA1O43805 119 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 PRKNO60260 465 aaPredicted RBP13.27□□□□□ -0.29
CDH1-213ENST00000612417 RENP00797 406 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 HPXP02790 462 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 TACR3P29371 465 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 P2RX1P51575 399 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 ART1P52961 327 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 CLDN12P56749 244 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 METTL11BQ5VVY1 283 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 PPP1R3BQ86XI6 285 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 SLC38A9Q8NBW4 561 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 BEST4Q8NFU0 473 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 OR8H1Q8NGG4 311 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 VN1R1Q9GZP7 353 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 SRA1Q9HD15 236 aaKnown RBP13.27□□□□□ -0.29
CDH1-213ENST00000612417 APMAPQ9HDC9 416 aa13.27□□□□□ -0.29
CDH1-213ENST00000612417 NOS1APO75052 506 aaPredicted RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 AKR7A3O95154 331 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 DDAH2O95865 285 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 CTRB1P17538 263 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 CDK2P24941 298 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 MECP2P51608 486 aaKnown RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 P2RX3P56373 397 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 ELAVL1Q15717 326 aaKnown RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 NKAIN1Q4KMZ8 207 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 CTRB2Q6GPI1 263 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 FAM109AQ8N4B1 249 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 ZNF563Q8TA94 476 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 ZNF417Q8TAU3 575 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 THRSPQ92748 146 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 GCDHQ92947 438 aaPredicted RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 SORCS2Q96PQ0 1159 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 DHRS9Q9BPW9 319 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
CDH1-213ENST00000612417 KLK11Q9UBX7 282 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 CPAMD8Q8IZJ3 1885 aa13.26□□□□□ -0.29
CDH1-213ENST00000612417 TCRBV16S1A1N1A0A5B0 115 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 SLC22A5O76082 557 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 BGLAPP02818 100 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms