RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 CHST11Q9NPF2 352 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 H0Y8G0 127 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 FBXO24O75426 580 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CDK1P06493 297 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 FABP1P07148 127 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 OR1C1Q15619 314 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SLC22A24Q8N4F4 322 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SAMD10Q9BYL1 202 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CHD4Q14839 1912 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 TRAF3IP2O43734 574 aaPredicted RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 FOXK2Q01167 660 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 C2orf76Q3KRA6 126 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 ARNTLO00327 626 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 RPS2P15880 293 aaKnown RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 NPPBP16860 134 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 IHHQ14623 411 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SLC16A11Q8NCK7 471 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 C1orf123Q9NWV4 160 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 PPP1R3CQ9UQK1 317 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 METTL12A8MUP2 240 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 ICOSLGO75144 302 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 RGS7BPQ6MZT1 257 aaPredicted RBP13.2□□□□□ -0.3
SYNRG-217ENST00000612223 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CMIPQ8IY22 773 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 CRYGNQ8WXF5 182 aa13.2□□□□□ -0.3
SYNRG-217ENST00000612223 LRIT2A6NDA9 550 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 CA5AP35218 305 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 ACTBL2Q562R1 376 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 OR2B11Q5JQS5 317 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 CPEP16870 476 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 GIFP27352 417 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 FRMPD2BQ6IN97 320 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 MRPS24Q96EL2 167 aaKnown RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 GORASP2Q9H8Y8 452 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 MYH1P12882 1939 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 ADH4P08319 380 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SLC19A1P41440 591 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 PFN3P60673 137 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 GLIPR1L1Q6UWM5 242 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 DPPA2Q7Z7J5 298 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 TUBG2Q9NRH3 451 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 P2RX6O15547 441 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SNRPBP14678 240 aaKnown RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 Q6ZPB1 254 aaPredicted RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 USP51Q70EK9 711 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 IL9P15248 144 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 CAPZBP47756 277 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 RPL27P61353 136 aaKnown RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 CRMP1Q14194 572 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 MTCH1Q9NZJ7 389 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 ASB4Q9Y574 426 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 LRRC37A3O60309 1634 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 OR2T7P0C7T2 308 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 GFYI3L273 518 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 BMP2P12643 396 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 INSM1Q01101 510 aaPredicted RBP13.19□□□□□ -0.3
SYNRG-217ENST00000612223 GUSBP11Q6P575 273 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 SORT1Q99523 831 aa13.19□□□□□ -0.3
SYNRG-217ENST00000612223 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 CLN3Q13286 438 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 ALKBH1Q13686 389 aaKnown RBP13.18□□□□□ -0.3
SYNRG-217ENST00000612223 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
SYNRG-217ENST00000612223 NOXA1Q86UR1 476 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 BANF2Q9H503 90 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-217ENST00000612223 SLC22A23A1A5C7 686 aa13.18□□□□□ -0.3
SYNRG-217ENST00000612223 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
SYNRG-217ENST00000612223 BCL7CQ8WUZ0 217 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms