RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 ANGPTL7O43827 346 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 ICAM2P13598 275 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 MED25Q71SY5 747 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 OR10J5Q8NHC4 309 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 FGF13Q92913 245 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TRAV36DV7A0A075B6V5 113 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
USP6NL-205ENST00000609104 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 OR51A4Q8NGJ6 313 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 OR51A2Q8NGJ7 313 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 PRELID3BQ9Y3B1 194 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TMED7-TICAM2A0A0A6YYA0 188 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TNFRSF4P43489 277 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 DMWDQ09019 674 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 NGBQ9NPG2 151 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TMED7Q9Y3B3 224 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 CLEC2LP0C7M8 214 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TACR1P25103 407 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 HLA-FP30511 346 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 KCTD11Q693B1 232 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 ST8SIA2Q92186 375 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 GPR55Q9Y2T6 319 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-205ENST00000609104 H0YIV9 168 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM104Q8NE00 496 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 OR5M1Q8NGP8 315 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 OR1J2Q8NGS2 313 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TRIM23P36406 574 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 DUSP6Q16828 381 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM64Q6YI46 380 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 CPXM2Q8N436 756 aa12.06□□□□□ -0.48
USP6NL-205ENST00000609104 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 SLC16A6O15403 523 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 DCDP81605 110 aaKnown RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ADGRE4PQ86SQ3 457 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 MISPQ8IVT2 679 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 UTP23Q9BRU9 249 aaKnown RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZNF133P52736 654 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZMAT1Q5H9K5 638 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM102Q8N9M5 508 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 RACK1P63244 317 aaKnown RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 HAGHQ16775 308 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 RFLNAQ6ZTI6 216 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 TMEM200CA6NKL6 621 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 PKDCCQ504Y2 493 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 HIST2H3AQ71DI3 136 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 SLC46A3Q7Z3Q1 461 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 BPIFCQ8NFQ6 507 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 TM4SF18Q96CE8 201 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 hCG_1809904A0A1W2PP81 198 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 A0A1W2PPE2 198 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 A0A1W2PR64 198 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 A0A1W2PRV1 198 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZNF587BE7ETH6 402 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 SLC14A2Q15849 920 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 LSMEM2Q8N112 164 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZNRF4Q8WWF5 429 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 SLC35D1Q9NTN3 355 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 HCCSP53701 268 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZNF718Q3SXZ3 478 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 LCORQ96JN0 433 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 UQCC2Q9BRT2 126 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 B3GAT1Q9P2W7 334 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 CSF3P09919 207 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 DUSP1P28562 367 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 KIAA0141Q14154 515 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 FAM74A1Q5RGS3 127 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 VRK3Q8IV63 474 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
USP6NL-205ENST00000609104 ZC3HAV1LQ96H79 300 aaKnown RBP12.05□□□□□ -0.48
USP6NL-205ENST00000609104 H3BNC9 293 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 TAPBPO15533 448 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 B4GALT3O60512 393 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 HOXD9P28356 352 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-205ENST00000609104 RAB35Q15286 201 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 A0A1B0GWA3 101 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP6NL-205ENST00000609104 H3F3CQ6NXT2 135 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 Q6ZRG5 221 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
USP6NL-205ENST00000609104 SEMA6CQ9H3T2 930 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 SIGLEC6O43699 453 aa12.04□□□□□ -0.48
USP6NL-205ENST00000609104 CXCL12P48061 93 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms