RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PMF1-BGLAPU3KQ54 211 aa10.61□□□□□ -0.71
CTSA-210ENST00000606000 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 TRBV4-1A0A0J9YWV2 114 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 B9A039 149 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 IGHMP01871 453 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 NR4A1P22736 598 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 ZNF84P51523 738 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 ZNF133P52736 654 aaPredicted RBP10.6□□□□□ -0.71
CTSA-210ENST00000606000 RPL27P61353 136 aaKnown RBP10.6□□□□□ -0.71
CTSA-210ENST00000606000 ERVK-25P63136 954 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 CD47Q08722 323 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 SEC23BQ15437 767 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 FGD3Q5JSP0 725 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 C10orf128Q5T292 105 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 SLC16A14Q7RTX9 510 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 OAFQ86UD1 273 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 LRP11Q86VZ4 500 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 OR52J3Q8NH60 311 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 ZNF519Q8TB69 540 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 FAM168AQ92567 244 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 C7orf34Q96L11 122 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 LRRC37BQ96QE4 947 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 DOK1Q99704 481 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 MRPL37Q9BZE1 423 aaKnown RBP10.6□□□□□ -0.71
CTSA-210ENST00000606000 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 RNF121Q9H920 327 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 MYEF2Q9P2K5 600 aaKnown RBP10.6□□□□□ -0.71
CTSA-210ENST00000606000 CD300AQ9UGN4 299 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 ADAM18Q9Y3Q7 739 aa10.6□□□□□ -0.71
CTSA-210ENST00000606000 ALPK2Q86TB3 2170 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 NPIPB13A6NJU9 1138 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 NPIPB4C9JG80 1138 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 ARPC2O15144 300 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 FARS2O95363 451 aaKnown RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 F12P00748 615 aaPredicted RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 SEMG1P04279 462 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 SERPINA5P05154 406 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 H1F0P07305 194 aaKnown RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 FAM157BP0CG42 384 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 BMP4P12644 408 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 SLC9A3P48764 834 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 PPOXP50336 477 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 ERVS71-1P61550 626 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 MAD2L1BPQ15013 274 aaPredicted RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 CARTPTQ16568 116 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 FXNQ16595 210 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 IQCCQ4KMZ1 466 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 OTPQ5XKR4 325 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 SLC25A47Q6Q0C1 308 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 CYP4Z1Q86W10 505 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 SLC30A7Q8NEW0 376 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 CDRT15Q96T59 188 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 IL20RAQ9UHF4 553 aa10.59□□□□□ -0.71
CTSA-210ENST00000606000 SAMD4AQ9UPU9 718 aaKnown RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 MAP1AP78559 2803 aaPredicted RBP10.59□□□□□ -0.71
CTSA-210ENST00000606000 PLCE1Q9P212 2302 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 NF1P21359 2839 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 CENPBD1B2RD01 187 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 IMPA2O14732 288 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 MGRN1O60291 552 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 DCTN3O75935 186 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 SCG5P05408 212 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 HSD17B1P14061 328 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 APEX1P27695 318 aaKnown RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 ALDH3B1P43353 468 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 OMPP47874 163 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 LIMS1P48059 325 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 FXYD6P3P58550 94 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 MRPS34P82930 218 aaKnown RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 MXRA7P84157 204 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 SGCAQ16586 387 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 ALKBH6Q3KRA9 238 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 SLC36A2Q495M3 483 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 MESTQ5EB52 335 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 GKAP1Q5VSY0 366 aaPredicted RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 TMPRSS11FQ6ZWK6 438 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 HDDC2Q7Z4H3 204 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 RNF113BQ8IZP6 322 aaKnown RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 FITM2Q8N6M3 262 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 CPEB3Q8NE35 698 aaKnown RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 IL17RDQ8NFM7 739 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
CTSA-210ENST00000606000 RASD2Q96D21 266 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 Q96M85 177 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 GPA33Q99795 319 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 FUZQ9BT04 418 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 ANKRD19PQ9H560 264 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 GORASP2Q9H8Y8 452 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
CTSA-210ENST00000606000 MAGEL2Q9UJ55 1249 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms