RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 WFDC6Q9BQY6 131 aa14.19□□□□□ -0.14
USE1-208ENST00000600970 PAIP1Q9H074 479 aaKnown RBP14.19□□□□□ -0.14
USE1-208ENST00000600970 RAD21L1Q9H4I0 556 aa14.19□□□□□ -0.14
USE1-208ENST00000600970 MMP26Q9NRE1 261 aa14.19□□□□□ -0.14
USE1-208ENST00000600970 PURGQ9UJV8 347 aaKnown RBP14.19□□□□□ -0.14
USE1-208ENST00000600970 IQCMA0A1B0GVH7 501 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 HDAC3O15379 428 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 OR6A2O95222 327 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 MT-ATP6P00846 226 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 POLR2JP52435 117 aaKnown RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 RGS8P57771 180 aaPredicted RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 SLC3A1Q07837 685 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 MELKQ14680 651 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 SLC36A2Q495M3 483 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 NXNQ6DKJ4 435 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 SLC16A14Q7RTX9 510 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 RBM15BQ8NDT2 890 aaKnown RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 GTF2H4Q92759 462 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 SLC25A44Q96H78 314 aaPredicted RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 TMEM109Q9BVC6 243 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 LRMDAQ9H2I8 198 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 SSU72Q9NP77 194 aaKnown RBP14.18□□□□□ -0.14
USE1-208ENST00000600970 ZIM2Q9NZV7 527 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 AUP1Q9Y679 476 aa14.18□□□□□ -0.14
USE1-208ENST00000600970 TRPC5OSA6NMA1 111 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 TRAPPC2LH3BP13 241 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 QDPRP09417 244 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 PGA4P0DJD7 388 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 PGA3P0DJD8 388 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 HOXB9P17482 250 aaPredicted RBP14.17□□□□□ -0.14
USE1-208ENST00000600970 MPV17P39210 176 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 PLP2Q04941 152 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 ZNF154Q13106 437 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
USE1-208ENST00000600970 MPP2Q14168 576 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 KRT73Q86Y46 540 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 OR9I1Q8NGQ6 314 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 SPATA5L1Q9BVQ7 753 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 SDR39U1Q9NRG7 319 aaPredicted RBP14.17□□□□□ -0.14
USE1-208ENST00000600970 TAS2R5Q9NYW4 299 aa14.17□□□□□ -0.14
USE1-208ENST00000600970 POLR3KQ9Y2Y1 108 aaPredicted RBP14.17□□□□□ -0.14
USE1-208ENST00000600970 PRKDCP78527 4128 aaKnown RBP14.17□□□□□ -0.14
USE1-208ENST00000600970 ZSCAN5BA6NJL1 495 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 CLDN34H7C241 214 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 MMP7P09237 267 aaPredicted RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 KITP10721 976 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 ZNF12P17014 697 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 MDKP21741 143 aaPredicted RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 CCNOP22674 350 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 APLNRP35414 380 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 CDK6Q00534 326 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 SLC9A3R2Q15599 337 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 OCLNQ16625 522 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 ZNF718Q3SXZ3 478 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 NRN1LQ496H8 165 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 SPRNQ5BIV9 151 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 SPATA46Q5T0L3 261 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 THEM4Q5T1C6 240 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 SWT1Q5T5J6 900 aaKnown RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 REEP3Q6NUK4 255 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 LEG1Q6P5S2 330 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 SLC2A7Q6PXP3 512 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 LINC00114Q6XXX2 140 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 C10orf111Q8N326 155 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 LRRC18Q8N456 261 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 CPEB3Q8NE35 698 aaKnown RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 IPCEF1Q8WWN9 437 aaPredicted RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 MARS2Q96GW9 593 aaKnown RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 MAELQ96JY0 434 aaKnown RBP14.16□□□□□ -0.14
USE1-208ENST00000600970 EGLN1Q9GZT9 426 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 DCAF16Q9NXF7 216 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 INSIG2Q9Y5U4 225 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 NPTNQ9Y639 398 aa14.16□□□□□ -0.14
USE1-208ENST00000600970 PLSCR5A0PG75 271 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 RNF13O43567 381 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 IGHV2-70P01814 119 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 IGHMP01871 453 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 ADH4P08319 380 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 SBK2P0C263 348 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 GCH1P30793 250 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 WNT5AP41221 380 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 VSNL1P62760 191 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 HIST3H3Q16695 136 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 CEP85LQ5SZL2 805 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 GCNT6Q5T4J0 391 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 HHATQ5VTY9 493 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 RANBP3LQ86VV4 465 aaPredicted RBP14.15□□□□□ -0.14
USE1-208ENST00000600970 ZNF101Q8IZC7 436 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 GEMIN6Q8WXD5 167 aaKnown RBP14.15□□□□□ -0.14
USE1-208ENST00000600970 MCHR2Q969V1 340 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 ZNF347Q96SE7 839 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 MRI1Q9BV20 369 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 MS4A7Q9GZW8 240 aaPredicted RBP14.15□□□□□ -0.14
USE1-208ENST00000600970 SLC25A37Q9NYZ2 338 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 EGFL7Q9UHF1 273 aa14.15□□□□□ -0.14
USE1-208ENST00000600970 RGS16O15492 202 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms