RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 IFFO1Q0D2I5 559 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 FADDQ13158 208 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 NPTX1Q15818 432 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 FAM209AQ5JX71 171 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 THEM4Q5T1C6 240 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 LRIF1Q5T3J3 769 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 SLC2A7Q6PXP3 512 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 SLC35D2Q76EJ3 337 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 RETREG3Q86VR2 466 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 SNX32Q86XE0 403 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ZNF101Q8IZC7 436 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 KIRREL3Q8IZU9 778 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 MIER2Q8N344 545 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 OR4K5Q8NGD3 323 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 OR4D11Q8NGI4 311 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 OR5J2Q8NH18 312 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 NFKBIDQ8NI38 313 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 MGARPQ8TDB4 240 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 CCL17Q92583 94 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 RAB1CQ92928 201 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 POP5Q969H6 163 aaKnown RBP5.16□□□□□ -1.58
VRK3-220ENST00000600259 NMD3Q96D46 503 aaKnown RBP5.16□□□□□ -1.58
VRK3-220ENST00000600259 SLC25A44Q96H78 314 aaPredicted RBP5.16□□□□□ -1.58
VRK3-220ENST00000600259 POM121L2Q96KW2 1035 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 OR52B2Q96RD2 323 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ZBTB18Q99592 522 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 EPYCQ99645 322 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ZNF426Q9BUY5 554 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 BCL2L14Q9BZR8 327 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 OR51B6Q9H340 312 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 IKZF5Q9H5V7 419 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 NPHS2Q9NP85 383 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 PLEK2Q9NYT0 353 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 GPR160Q9UJ42 338 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 NUP50Q9UKX7 468 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 IGKV1D-43A0A0B4J1Z2 117 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 A0A0G2JK05 382 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TMEM247A6NEH6 219 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 C11orf98E9PRG8 122 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 SPRY3O43610 288 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ICMTO60725 284 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 FMO6PO60774 539 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ERLIN1O75477 346 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 FOXH1O75593 365 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ANP32DO95626 131 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MT-ATP6P00846 226 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 CD55P08174 381 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TSPAN19P0C672 248 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ASAH2BP0C7U1 165 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 GPX2P18283 190 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 AHCYP23526 432 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 LSP1P33241 339 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 CD80P33681 288 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MRPL19P49406 292 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 ZNF81P51508 661 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PCBP3P57721 371 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 SEC61A1P61619 476 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 IL13RA1P78552 427 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 CDK6Q00534 326 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PAX8Q06710 450 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 ZNF154Q13106 437 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 CDK5R2Q13319 367 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MELKQ14680 651 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 SLC9A3R2Q15599 337 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ZNF74Q16587 644 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MOGQ16653 247 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 DUSP7Q16829 419 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 HFEQ30201 348 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PAGE3Q5JUK9 113 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 HHATQ5VTY9 493 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MBNL2Q5VZF2 373 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 REEP3Q6NUK4 255 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TMEM53Q6P2H8 277 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 LEG1Q6P5S2 330 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 C9orf139Q6ZV77 190 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 SLC16A14Q7RTX9 510 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 DPPA2Q7Z7J5 298 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 LRRC28Q86X40 367 aaPredicted RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 RBM45Q8IUH3 476 aaKnown RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 GPR32P1Q8NGA4 272 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 OR1J1Q8NGS3 322 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 KLF14Q8TD94 323 aaPredicted RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 SNX33Q8WV41 574 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 MCHR2Q969V1 340 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ZNF566Q969W8 418 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 NABP1Q96AH0 204 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 DACT3Q96B18 629 aaPredicted RBP5.15□□□□□ -1.59
VRK3-220ENST00000600259 ELMOD3Q96FG2 381 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TIMD4Q96H15 378 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 GPA33Q99795 319 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 ARHGDIGQ99819 225 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PRSS27Q9BQR3 290 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 C1orf198Q9H425 327 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 PRDM13Q9H4Q3 707 aa5.15□□□□□ -1.59
VRK3-220ENST00000600259 TMEM38AQ9H6F2 299 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms