RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CCDC28BQ9BUN5 200 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 SLC19A3Q9BZV2 496 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 IQCMA0A1B0GVH7 501 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 CLDN25C9JDP6 229 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 PLPP2O43688 288 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 DEAF1O75398 565 aaPredicted RBP18.04■□□□□ 0.48
PNKP-212ENST00000599454 RGS9O75916 674 aaPredicted RBP18.04■□□□□ 0.48
PNKP-212ENST00000599454 CH25HO95992 272 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 IGHG1P01857 330 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 QDPRP09417 244 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 GATA3P23771 443 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 ZNF84P51523 738 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 MVKQ03426 396 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 FAM209AQ5JX71 171 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 ENTPD8Q5MY95 495 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 TIMD4Q96H15 378 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 MPP4Q96JB8 637 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 TSPAN32Q96QS1 320 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 CPPED1Q9BRF8 314 aaPredicted RBP18.04■□□□□ 0.48
PNKP-212ENST00000599454 TMPRSS13Q9BYE2 586 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 DECR2Q9NUI1 292 aa18.04■□□□□ 0.48
PNKP-212ENST00000599454 CENPBD1B2RD01 187 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 WIPF1O43516 503 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 BCL10O95999 233 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 AVPP01185 164 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 IGHV2-5P01817 119 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 CCL2P13500 99 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 EGR1P18146 543 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 DRD4P21917 467 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 CLRN1P58418 232 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 MELKQ14680 651 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 HIST3H3Q16695 136 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 HFEQ30201 348 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 AVPI1Q5T686 147 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 USP51Q70EK9 711 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 HDDC2Q7Z4H3 204 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 RBM15BQ8NDT2 890 aaKnown RBP18.03■□□□□ 0.48
PNKP-212ENST00000599454 OR6T1Q8NGN1 323 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 NANPQ8TBE9 248 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 ADAMTS16Q8TE57 1224 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 RAB1CQ92928 201 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 TLCD1Q96CP7 247 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 OR51B6Q9H340 312 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 SAP30LQ9HAJ7 183 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 TRIM33Q9UPN9 1127 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 WIPI2Q9Y4P8 454 aa18.03■□□□□ 0.48
PNKP-212ENST00000599454 TRAPPC13A5PLN9 417 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 CPSF4LA6NMK7 179 aaKnown RBP18.02■□□□□ 0.48
PNKP-212ENST00000599454 TPD52L2O43399 206 aaKnown RBP18.02■□□□□ 0.48
PNKP-212ENST00000599454 IGHV3-13P01766 116 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 ASAH2BP0C7U1 165 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 APLNRP35414 380 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 IDH3AP50213 366 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 ATP4BP51164 291 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 ERVS71-1P61550 626 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 NPTX1Q15818 432 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 DUSP7Q16829 419 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 RUNDC3AQ59EK9 446 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 DCAF12L2Q5VW00 463 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 SLC30A8Q8IWU4 369 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 ELMOD3Q96FG2 381 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 ZNF426Q9BUY5 554 aa18.02■□□□□ 0.48
PNKP-212ENST00000599454 M0QX08 132 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 ERLIN1O75477 346 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 LYPD3O95274 346 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 CYP51A1Q16850 503 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 AGKQ53H12 422 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 UNQ6126/PRO20091Q6UXV3 157 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 DLEU7Q6UYE1 221 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 NANOGNBQ7Z5D8 188 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 PTOV1Q86YD1 416 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 LRRC17Q8N6Y2 441 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 GPR32P1Q8NGA4 272 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 MCHR2Q969V1 340 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 SEPHS2Q99611 448 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 PCDHAC1Q9H158 963 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 KCNN2Q9H2S1 579 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 STX18Q9P2W9 335 aaKnown RBP18.01■□□□□ 0.47
PNKP-212ENST00000599454 SLC7A7Q9UM01 511 aa18.01■□□□□ 0.47
PNKP-212ENST00000599454 THY1P04216 161 aa18■□□□□ 0.47
PNKP-212ENST00000599454 MMP7P09237 267 aaPredicted RBP18■□□□□ 0.47
PNKP-212ENST00000599454 UMPSP11172 480 aa18■□□□□ 0.47
PNKP-212ENST00000599454 ZNF81P51508 661 aa18■□□□□ 0.47
PNKP-212ENST00000599454 ZNF133P52736 654 aaPredicted RBP18■□□□□ 0.47
PNKP-212ENST00000599454 HSF2Q03933 536 aa18■□□□□ 0.47
PNKP-212ENST00000599454 SLC3A1Q07837 685 aa18■□□□□ 0.47
PNKP-212ENST00000599454 PATL1Q86TB9 770 aaKnown RBP18■□□□□ 0.47
PNKP-212ENST00000599454 RETREG3Q86VR2 466 aa18■□□□□ 0.47
PNKP-212ENST00000599454 C1orf174Q8IYL3 243 aa18■□□□□ 0.47
PNKP-212ENST00000599454 BPIFB2Q8N4F0 458 aa18■□□□□ 0.47
PNKP-212ENST00000599454 ICA1LQ8NDH6 482 aa18■□□□□ 0.47
PNKP-212ENST00000599454 CPEB3Q8NE35 698 aaKnown RBP18■□□□□ 0.47
PNKP-212ENST00000599454 NOXO1Q8NFA2 376 aa18■□□□□ 0.47
PNKP-212ENST00000599454 OR1J1Q8NGS3 322 aa18■□□□□ 0.47
PNKP-212ENST00000599454 ZNF347Q96SE7 839 aa18■□□□□ 0.47
PNKP-212ENST00000599454 EBF4Q9BQW3 602 aa18■□□□□ 0.47
PNKP-212ENST00000599454 MRPL13Q9BYD1 178 aaKnown RBP18■□□□□ 0.47
PNKP-212ENST00000599454 RABEP2Q9H5N1 569 aa18■□□□□ 0.47
PNKP-212ENST00000599454 TMBIM4Q9HC24 238 aa18■□□□□ 0.47
PNKP-212ENST00000599454 LEF1Q9UJU2 399 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms