RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 ZCCHC24Q8N2G6 241 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 MSI2Q96DH6 328 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 SOX7Q9BT81 388 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 CADM1Q9BY67 442 aaKnown RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 KRCC1Q9NPI7 259 aaPredicted RBP10.83□□□□□ -0.68
UPF1-203ENST00000594504 CA10Q9NS85 328 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 TMEM160Q9NX00 188 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 MED29Q9NX70 200 aa10.83□□□□□ -0.68
UPF1-203ENST00000594504 TRBV4-1A0A0J9YWV2 114 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 LOC100289279A0A1B0GTE1 492 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 ZNF503-AS2A6NEH8 195 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 ZNF726A6NNF4 738 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 CRYAAP02489 173 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 CSF3P09919 207 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 OR4A8P0C604 315 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 CECR9P0C854 216 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 IFNGR1P15260 489 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 HOXB6P17509 224 aaKnown RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 MAKP20794 623 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 AQP2P41181 271 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 SLC9A3P48764 834 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 SNRPD2P62316 118 aaKnown RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 ROR2Q01974 943 aaKnown RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 HGFACQ04756 655 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 FLOT2Q14254 428 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 SLC35D2Q76EJ3 337 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 OAFQ86UD1 273 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 GPR137CQ8N3F9 429 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 OR4K5Q8NGD3 323 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 OR52J3Q8NH60 311 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 OR6X1Q8NH79 312 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 LRR1Q96L50 414 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 PIMREGQ9BSJ6 248 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 FUZQ9BT04 418 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 EMC6Q9BV81 110 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 MMADHCQ9H3L0 296 aaPredicted RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 INIPQ9NRY2 104 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 HIF3AQ9Y2N7 669 aa10.82□□□□□ -0.68
UPF1-203ENST00000594504 SONP18583 2426 aaKnown RBP10.82□□□□□ -0.68
UPF1-203ENST00000594504 ARPC4-TTLL3A0A0A6YYG9 625 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 A0A1W2PRG6 482 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 SH3PXD2BA1X283 911 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 LRP5LA4QPB2 252 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 NPIPB13A6NJU9 1138 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 NPIPB4C9JG80 1138 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 RPL36A-HNRNPH2H7BZ11 118 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 KRT36O76013 467 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 SEC14L2O76054 403 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 BCL10O95999 233 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 F13BP05160 661 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 RAP2AP10114 183 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 APEHP13798 732 aaKnown RBP10.81□□□□□ -0.68
UPF1-203ENST00000594504 RRM2P31350 389 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 THBS4P35443 961 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 GPR4P46093 362 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 GZMKP49863 264 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 DAP3P51398 398 aaKnown RBP10.81□□□□□ -0.68
UPF1-203ENST00000594504 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
UPF1-203ENST00000594504 BIDP55957 195 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 SEC23BQ15437 767 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 ALG10Q5BKT4 473 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 PHYHD1Q5SRE7 291 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 FAM120AOSQ5T036 256 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 C1QTNF12Q5T7M4 302 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 CARD17Q5XLA6 110 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 HDDC2Q7Z4H3 204 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 C20orf196Q8IYI0 205 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 MOSPD2Q8NHP6 518 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 FAM46AQ96IP4 442 aaKnown RBP10.81□□□□□ -0.68
UPF1-203ENST00000594504 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 BPESC1Q9GZL8 116 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 OBP2BQ9NPH6 170 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 B3GAT2Q9NPZ5 323 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 CRNNQ9UBG3 495 aaPredicted RBP10.81□□□□□ -0.68
UPF1-203ENST00000594504 SLC7A8Q9UHI5 535 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 TMCC3Q9ULS5 477 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 POMPQ9Y244 141 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 FKBP7Q9Y680 259 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
UPF1-203ENST00000594504 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 DHRS12A0PJE2 317 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 B9A039 149 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 MCIDASD6RGH6 385 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 M0R3G1 203 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 CDC42EP2O14613 210 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 TGFAP01135 160 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 IGLV1-44P01699 117 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 CBR1P16152 277 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 IFNGR2P38484 337 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 OMPP47874 163 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 LIMS1P48059 325 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
UPF1-203ENST00000594504 IDH3GP51553 393 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms