RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 LDOC1O95751 146 aaPredicted RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 ADH7P40394 386 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 EFNB2P52799 333 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 SKP1P63208 163 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 YOD1Q5VVQ6 348 aaPredicted RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 OR7E24Q6IFN5 339 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 HSD17B13Q7Z5P4 300 aaPredicted RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 PRR22Q8IZ63 422 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 PRSS35Q8N3Z0 413 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 LIPHQ8WWY8 451 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 TAAR8Q969N4 342 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 GINS4Q9BRT9 223 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 COMMD4Q9H0A8 199 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 NKX2-4Q9H2Z4 354 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 KCNK15Q9H427 330 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 PRODH2Q9UF12 536 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 FBXL2Q9UKC9 423 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 ALPK2Q86TB3 2170 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 TDRD6O60522 2096 aaKnown RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 FXYD6-FXYD2A0A087WZ82 144 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 MEIS3P1A6NDR6 274 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 C17orf51A8MQB3 221 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ZNF264O43296 627 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 SRPX2O60687 465 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 FBXO45P0C2W1 286 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 MAOBP27338 520 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 TACR3P29371 465 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 MRPS21P82921 87 aaKnown RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 LRRN1Q6UXK5 716 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 GSG1LQ6UXU4 331 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 ZNF227Q86WZ6 799 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 OR51D1Q8NGF3 324 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ATOH1Q92858 354 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 NKX3-1Q99801 234 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 FXYD6Q9H0Q3 95 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 NXF5Q9H1B4 397 aaKnown RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 PNO1Q9NRX1 252 aaKnown RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 GPR160Q9UJ42 338 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 CHURC1-FNTBB4DL54 471 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 RAD1O60671 282 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ZNF254O75437 659 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 RBBP9O75884 186 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 UTS2O95399 124 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 TXNDC12O95881 172 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ALOX5APP20292 161 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 UBE2MP61081 183 aaKnown RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 GUCA2AQ02747 115 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 DMWDQ09019 674 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 GK2Q14410 553 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 MELKQ14680 651 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 ZNF660Q6AZW8 331 aaPredicted RBP14.93□□□□□ -0.02
LIG1-206ENST00000594067 TMEM184AQ6ZMB5 413 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 PM20D2Q8IYS1 436 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 OR4D10Q8NGI6 311 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 OR4C16Q8NGL9 310 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 OR5M9Q8NGP3 310 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 RELTQ969Z4 430 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 STEAP1Q9UHE8 339 aa14.93□□□□□ -0.02
LIG1-206ENST00000594067 CACNA1IQ9P0X4 2223 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 TRBV5-7A0A0A0MS05 114 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 UBE2QL1A1L167 161 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 RENP00797 406 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 ZNF35P13682 527 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 DRD1P21728 446 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 RBMS2Q15434 407 aaKnown RBP14.92□□□□□ -0.02
LIG1-206ENST00000594067 DCAF12L2Q5VW00 463 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 EIF4E3Q8N5X7 224 aaKnown RBP14.92□□□□□ -0.02
LIG1-206ENST00000594067 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 ZNF417Q8TAU3 575 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 GPR148Q8TDV2 347 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 CCNL2Q96S94 520 aaPredicted RBP14.92□□□□□ -0.02
LIG1-206ENST00000594067 INTS14Q96SY0 518 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 RTN4RQ9BZR6 473 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 MED11Q9P086 117 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 KCNG2Q9UJ96 466 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 GMEB2Q9UKD1 530 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 CYP8B1Q9UNU6 501 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 C11orf98E9PRG8 122 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 H7C417 338 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 XRCC3O43542 346 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 KIR3DL2P43630 455 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 HSD17B7P56937 341 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 SHHQ15465 462 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 C1QL3Q5VWW1 255 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 PDZD9Q8IXQ8 264 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 SDR16C5Q8N3Y7 309 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 OR2AK2Q8NG84 335 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 C15orf40Q8WUR7 153 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 TSEN15Q8WW01 171 aaKnown RBP14.92□□□□□ -0.02
LIG1-206ENST00000594067 ADOQ96SZ5 270 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 CLEC1BQ9P126 229 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 MTFP1Q9UDX5 166 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 GON4LQ3T8J9 2241 aa14.92□□□□□ -0.02
LIG1-206ENST00000594067 IL33O95760 270 aa14.91□□□□□ -0.02
LIG1-206ENST00000594067 RLN1P04808 185 aa14.91□□□□□ -0.02
LIG1-206ENST00000594067 CSRP1P21291 193 aaKnown RBP14.91□□□□□ -0.02
LIG1-206ENST00000594067 CENPAP49450 140 aa14.91□□□□□ -0.02
LIG1-206ENST00000594067 UBXN2BQ14CS0 331 aa14.91□□□□□ -0.02
LIG1-206ENST00000594067 WDR38Q5JTN6 314 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms