RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
VMP1-209ENST00000588915 MVKQ03426 396 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 DUSP7Q16829 419 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 HFEQ30201 348 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 TTC33Q6PID6 262 aaPredicted RBP11.92□□□□□ -0.5
VMP1-209ENST00000588915 UNQ6126/PRO20091Q6UXV3 157 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 THSD4Q6ZMP0 1018 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 HIST3H2AQ7L7L0 130 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 SLC16A14Q7RTX9 510 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 HIST1H2ACQ93077 130 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 ZNF426Q9BUY5 554 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 IKZF5Q9H5V7 419 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 CCDC167Q9P0B6 97 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
VMP1-209ENST00000588915 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
VMP1-209ENST00000588915 MGAM2Q2M2H8 2515 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 PPIAL4EA0A075B759 164 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 PPIAL4DF5H284 164 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 M0QX08 132 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 CH25HO95992 272 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ASAH2BP0C7U1 165 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 PPIAL4FP0DN26 164 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 DRD4P21917 467 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 FPR2P25090 351 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 APLNRP35414 380 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ZNF133P52736 654 aaPredicted RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 MAGOHP61326 146 aaKnown RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 SLC3A1Q07837 685 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ALKBH6Q3KRA9 238 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 DCAF12L2Q5VW00 463 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 USP51Q70EK9 711 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 HDDC2Q7Z4H3 204 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 SMYD1Q8NB12 490 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 CPEB3Q8NE35 698 aaKnown RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 OR4K5Q8NGD3 323 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ADAMTS16Q8TE57 1224 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 MCHR2Q969V1 340 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 SEPHS2Q99611 448 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 MRPL13Q9BYD1 178 aaKnown RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 PCDHAC1Q9H158 963 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 KCNN2Q9H2S1 579 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 STX18Q9P2W9 335 aaKnown RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.91□□□□□ -0.5
VMP1-209ENST00000588915 TRIM33Q9UPN9 1127 aa11.91□□□□□ -0.5
VMP1-209ENST00000588915 WNK2Q9Y3S1 2297 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 TRAPPC13A5PLN9 417 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 LYPD3O95274 346 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 IGF2P01344 180 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 ADH4P08319 380 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
VMP1-209ENST00000588915 CCL2P13500 99 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 AQP1P29972 269 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 LIPAP38571 399 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 ATP4BP51164 291 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 CLRN1P58418 232 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 ZNF718Q3SXZ3 478 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 RUNDC3AQ59EK9 446 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 C10orf128Q5T292 105 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 DLEU7Q6UYE1 221 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 RBM15BQ8NDT2 890 aaKnown RBP11.9□□□□□ -0.5
VMP1-209ENST00000588915 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 TSPAN32Q96QS1 320 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 SIAEQ9HAT2 523 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 CYSLTR2Q9NS75 346 aa11.9□□□□□ -0.5
VMP1-209ENST00000588915 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
VMP1-209ENST00000588915 M0R3H8 397 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
VMP1-209ENST00000588915 FSHBP01225 129 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 THY1P04216 161 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 ADRA2CP18825 462 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 IDH3AP50213 366 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 ZNF81P51508 661 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 ERVS71-1P61550 626 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 HSF2Q03933 536 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 MELKQ14680 651 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 NPTX1Q15818 432 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 AWAT1Q58HT5 328 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 NANOGNBQ7Z5D8 188 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 PATL1Q86TB9 770 aaKnown RBP11.89□□□□□ -0.51
VMP1-209ENST00000588915 PTOV1Q86YD1 416 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 ZDHHC22Q8N966 263 aa11.89□□□□□ -0.51
VMP1-209ENST00000588915 OR1J1Q8NGS3 322 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms