RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-206	ENST00000588300	CLPTM1	O96005	669 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	LCK	P06239	509 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	GAA	P10253	952 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF250	P15622	560 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	RAD52	P43351	418 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	MAGEB1	P43366	347 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	PLP2	Q04941	152 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	PCGF3	Q3KNV8	242 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	MMEL1	Q495T6	779 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	SHQ1	Q6PI26	577 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	HDDC2	Q7Z4H3	204 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	RBM15B	Q8NDT2	890 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	NOXO1	Q8NFA2	376 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	OR10A6	Q8NH74	314 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF519	Q8TB69	540 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	TSPEAR	Q8WU66	669 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	C11orf40	Q8WZ69	217 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	MCHR2	Q969V1	340 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	LRRC37B	Q96QE4	947 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF347	Q96SE7	839 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	PRSS27	Q9BQR3	290 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	BCL2L14	Q9BZR8	327 aa		13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	HINT3	Q9NQE9	182 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-206	ENST00000588300	CENPBD1	B2RD01	187 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	MGRN1	O60291	552 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	ERVS71-1	P61550	626 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	LMO4	P61968	165 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	CCL8	P80075	99 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	MYBPC1	Q00872	1141 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	TEK	Q02763	1124 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	RPL18	Q07020	188 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	HIST3H3	Q16695	136 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	VMAC	Q2NL98	169 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	TTMP	Q5BVD1	217 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	ICA1L	Q8NDH6	482 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	THOC1	Q96FV9	657 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	MEPE	Q9NQ76	525 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	INTS9	Q9NV88	658 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	NKIRAS2	Q9NYR9	191 aa		13.61	□□□□□ -0.23
ERCC1-206	ENST00000588300	TRAV20	A0A0B4J274	112 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	CDC14B	O60729	498 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	MT-ND1	P03886	318 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	MT-ND5	P03915	603 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	F13B	P05160	661 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	ANPEP	P15144	967 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	APLNR	P35414	380 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	DAP3	P51398	398 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	UGT2B15	P54855	530 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	UCP2	P55851	309 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	HSF2	Q03933	536 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	RUNX1T1	Q06455	604 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	MOG	Q16653	247 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	CCDC80	Q76M96	950 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	LRRC18	Q8N456	261 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	TEX29	Q8N6K0	151 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	SYT14	Q8NB59	555 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZFAND2B	Q8WV99	257 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	ASB10	Q8WXI3	467 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	TSPAN32	Q96QS1	320 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	SEPHS2	Q99611	448 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	MRPL13	Q9BYD1	178 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	KCNN2	Q9H2S1	579 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	INIP	Q9NRY2	104 aa		13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	STX18	Q9P2W9	335 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-206	ENST00000588300	TRMU	O75648	421 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	OR7A10	O76100	309 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	VENTX	O95231	258 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	PNP	P00491	289 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	MMP7	P09237	267 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	ACADS	P16219	412 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	FUT1	P19526	365 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	DRD4	P21917	467 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	RBM34	P42696	430 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	CRYBB2	P43320	205 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	GZMM	P51124	257 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF133	P52736	654 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	CRYBA2	P53672	197 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	TAS2R41	P59536	307 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	C10orf128	Q5T292	105 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	C12orf54	Q6X4T0	127 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	SEMA6D	Q8NFY4	1073 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	PFN4	Q8NHR9	129 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF418	Q8TF45	676 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	RAB39B	Q96DA2	213 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	SGTB	Q96EQ0	304 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	FAHD2A	Q96GK7	314 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	MAGEB18	Q96M61	343 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	POLR2J2	Q9GZM3	115 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	POLR2J3	Q9H1A7	115 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	ZNF665	Q9H7R5	613 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	NANOG	Q9H9S0	305 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	DECR2	Q9NUI1	292 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	BAG5	Q9UL15	447 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	SH3GLB1	Q9Y371	365 aa		13.59	□□□□□ -0.23
ERCC1-206	ENST00000588300	IGHV1-69-2	A0A0G2JMI3	117 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	TPD52L2	O43399	206 aa	Known RBP	13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR5F1	O95221	314 aa		13.58	□□□□□ -0.24
ERCC1-206	ENST00000588300	IGF2	P01344	180 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms