RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 OR2T5Q6IEZ7 315 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 NIPAL3Q6P499 406 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 UEVLDQ8IX04 471 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 ADPRHL1Q8NDY3 354 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 OR2T29Q8NH02 315 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 MSI2Q96DH6 328 aaKnown RBP13.59□□□□□ -0.23
SKA2-209ENST00000583976 FUZQ9BT04 418 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 SOX7Q9BT81 388 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 C19orf24Q9BVV8 132 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 NELFAQ9H3P2 528 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 VNN3Q9NY84 501 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 TMCC3Q9ULS5 477 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 FKBP7Q9Y680 259 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 U3KQV3 271 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 SH3PXD2BA1X283 911 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 GNGT2O14610 69 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 OR10H3O60404 316 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 FKBP6O75344 327 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 KRT36O76013 467 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 F12P00748 615 aaPredicted RBP13.58□□□□□ -0.24
SKA2-209ENST00000583976 CELA3BP08861 270 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 SRD5A1P18405 259 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 CALCRP30988 508 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 AQP2P41181 271 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 NR4A2P43354 598 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 PDLIM4P50479 330 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
SKA2-209ENST00000583976 TGFBR3Q03167 851 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 ZSCAN26Q16670 478 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 OAFQ86UD1 273 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 OR13C2Q8NGS9 318 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 OR51A7Q8NH64 312 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 MOSPD2Q8NHP6 518 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 TXNDC15Q96J42 360 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 SLC38A2Q96QD8 506 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 PIMREGQ9BSJ6 248 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 EMC6Q9BV81 110 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 REEP1Q9H902 201 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 CA10Q9NS85 328 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 PARPBPQ9NWS1 579 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 LPAR3Q9UBY5 353 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 KCNS2Q9ULS6 477 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
SKA2-209ENST00000583976 TRAV27A0A087WT01 109 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 A0A096LPE4 126 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 A0A1W2PPZ6 126 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 CDC42EP2O14613 210 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 UPK3AO75631 287 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 F13BP05160 661 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 CECR9P0C854 216 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 APEHP13798 732 aaKnown RBP13.57□□□□□ -0.24
SKA2-209ENST00000583976 OMPP47874 163 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 GZMKP49863 264 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
SKA2-209ENST00000583976 ADIPOQQ15848 244 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 FAM120AOSQ5T036 256 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 CARD17Q5XLA6 110 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 FAM166AQ6J272 317 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 POMGNT2Q8NAT1 580 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 LIPHQ8WWY8 451 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
SKA2-209ENST00000583976 KRCC1Q9NPI7 259 aaPredicted RBP13.57□□□□□ -0.24
SKA2-209ENST00000583976 MED29Q9NX70 200 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 TMEM5Q9Y2B1 443 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 SAMHD1Q9Y3Z3 626 aaKnown RBP13.57□□□□□ -0.24
SKA2-209ENST00000583976 NOX1Q9Y5S8 564 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 PMF1-BGLAPU3KQ54 211 aa13.57□□□□□ -0.24
SKA2-209ENST00000583976 LOC100289279A0A1B0GTE1 492 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 LRP5LA4QPB2 252 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 ZNF503-AS2A6NEH8 195 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 TRAF3IP2O43734 574 aaPredicted RBP13.56□□□□□ -0.24
SKA2-209ENST00000583976 TIPRLO75663 272 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 KRT33AO76009 404 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 WNT11O96014 354 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 BMP4P12644 408 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 IFNGR1P15260 489 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 LIMS1P48059 325 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 HMGA2P52926 109 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 ZP4Q12836 540 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 MELKQ14680 651 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 KPNB1Q14974 876 aaKnown RBP13.56□□□□□ -0.24
SKA2-209ENST00000583976 TMPRSS11FQ6ZWK6 438 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 ZER1Q7Z7L7 766 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 PAPD5Q8NDF8 572 aaKnown RBP13.56□□□□□ -0.24
SKA2-209ENST00000583976 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 OR9Q2Q8NGE9 314 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 OR4C15Q8NGM1 316 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 FOXN4Q96NZ1 517 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
SKA2-209ENST00000583976 GPA33Q99795 319 aa13.56□□□□□ -0.24
SKA2-209ENST00000583976 YY1AP1Q9H869 796 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms