RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TRAV36DV7A0A075B6V5 113 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 F5H0A9 414 aaPredicted RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 P2RY10O00398 339 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 HMGN4O00479 90 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 GPR37O15354 613 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 OR6A2O95222 327 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 PATE4P0C8F1 98 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 RPS4Y1P22090 263 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 AHCYP23526 432 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 GRPRP30550 384 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 ARHGDIAP52565 204 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 CLDN8P56748 225 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 ERVS71-1P61550 626 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 SEC61A1P61619 476 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 PLAURQ03405 335 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 FUT5Q11128 374 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 HERPUD1Q15011 391 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 KLHL22Q53GT1 634 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 MBNL2Q5VZF2 373 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 OR4F3Q6IEY1 312 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 C8orf74Q6P047 294 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 RIMKLAQ8IXN7 391 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 POU5F2Q8N7G0 328 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 OR8B3Q8NGG8 313 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 GEMIN6Q8WXD5 167 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 NEIL1Q96FI4 390 aaPredicted RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 OR8B2Q96RD0 313 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 FMO2Q99518 471 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 NUDT16L1Q9BRJ7 211 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 PTDSS2Q9BVG9 487 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 ACOXLQ9NUZ1 547 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 PPP1R3CQ9UQK1 317 aa9.32□□□□□ -0.92
CASC3-208ENST00000583649 CAB39Q9Y376 341 aaPredicted RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 SOX21Q9Y651 276 aaPredicted RBP9.32□□□□□ -0.92
CASC3-208ENST00000583649 CEACAM18A8MTB9 384 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 ENSAO43768 121 aaKnown RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 TIMM8AO60220 97 aaPredicted RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 LIPFP07098 398 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 WNT2P09544 360 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 TGFBR2P37173 567 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 ZNF84P51523 738 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 CRISP3P54108 245 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 PUDPQ08623 228 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 SYPL1Q16563 259 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 DPY19L1Q2PZI1 675 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 MTX3Q5HYI7 312 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 C6orf136Q5SQH8 315 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 THEM4Q5T1C6 240 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 RNF220Q5VTB9 566 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 SLC27A4Q6P1M0 643 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 PXKQ7Z7A4 578 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 LRRC34Q8IZ02 419 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 PAQR4Q8N4S7 273 aaPredicted RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 ANKFN1Q8N957 763 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 SCCPDHQ8NBX0 429 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 KLF14Q8TD94 323 aaPredicted RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 IPCEF1Q8WWN9 437 aaPredicted RBP9.31□□□□□ -0.92
CASC3-208ENST00000583649 SLC35B4Q969S0 331 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 TUBGCP3Q96CW5 907 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 PCGF1Q9BSM1 259 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 CENPHQ9H3R5 247 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 ELOVL3Q9HB03 270 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 CCNB1IP1Q9NPC3 277 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 TMEM38BQ9NVV0 291 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 GLTPQ9NZD2 209 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 P2RX2Q9UBL9 471 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 IFT52Q9Y366 437 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 FAM96BQ9Y3D0 163 aa9.31□□□□□ -0.92
CASC3-208ENST00000583649 A0A087WUJ7 227 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ZNF816-ZNF321PA0A0X1KG74 233 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ANKRD61A6NGH8 418 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ZSCAN5BA6NJL1 495 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 LRRC30A6NM36 301 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 TRIM13O60858 407 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 PROCP04070 461 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 G6PDP11413 515 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 STOMP27105 288 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 GDI2P50395 445 aaKnown RBP9.3□□□□□ -0.92
CASC3-208ENST00000583649 PCBP3P57721 371 aaKnown RBP9.3□□□□□ -0.92
CASC3-208ENST00000583649 FGF12P61328 243 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 SLC7A5Q01650 507 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 EGR3Q06889 387 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 LRRC74AQ0VAA2 488 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ZMYND11Q15326 602 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 COX20Q5RI15 118 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 CD276Q5ZPR3 534 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ANKRD46Q86W74 232 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 KLBQ86Z14 1044 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ALDH16A1Q8IZ83 802 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 C10orf53Q8N6V4 93 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 OR6S1Q8NH40 331 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 DNAJA4Q8WW22 397 aaPredicted RBP9.3□□□□□ -0.92
CASC3-208ENST00000583649 TAAR8Q969N4 342 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms