RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 GKAP1Q5VSY0 366 aaPredicted RBP11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 IGFN1Q86VF2 1251 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 LRRC18Q8N456 261 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 RBM15BQ8NDT2 890 aaKnown RBP11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 SLC30A7Q8NEW0 376 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 NEU4Q8WWR8 484 aaPredicted RBP11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 BPIFA2Q96DR5 249 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 DENND2DQ9H6A0 471 aaPredicted RBP11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 UGT2A1Q9Y4X1 527 aa11.67□□□□□ -0.54
CUEDC1-204ENST00000577497 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 M0R233 179 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 CXCR6O00574 342 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 SYNGR3O43761 229 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ZNF682O95780 498 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ZNF23P17027 643 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 GIFP27352 417 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 GSK3BP49841 420 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ZNF133P52736 654 aaPredicted RBP11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ST3GAL3Q11203 375 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 IQCCQ4KMZ1 466 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 HSP90B2PQ58FF3 399 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ALG10Q5BKT4 473 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 C10orf128Q5T292 105 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 CXXC5Q7LFL8 322 aaKnown RBP11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 SLC16A14Q7RTX9 510 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 ARPINQ7Z6K5 226 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 NRMQ8IXM6 262 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 OFCC1Q8IZS5 231 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 LRRC75AQ8NAA5 344 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 NSMAFQ92636 917 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 NABP1Q96AH0 204 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 TSPAN32Q96QS1 320 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 RNF121Q9H920 327 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 MED4Q9NPJ6 270 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 REV1Q9UBZ9 1251 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 SLC7A8Q9UHI5 535 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 SPEF1Q9Y4P9 236 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 MXRA5Q9NR99 2828 aa11.66□□□□□ -0.54
CUEDC1-204ENST00000577497 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 LOC100289279A0A1B0GTE1 492 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 LMX1BO60663 402 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 LILRA1O75019 489 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 NCR1O76036 304 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 PRSS23O95084 383 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 CLPTM1O96005 669 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 SERPINA1P01009 418 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 HPXP02790 462 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 IFNW1P05000 195 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 NAT2P11245 290 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 NCK1P16333 377 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 EVX1P49640 407 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 GZMKP49863 264 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 NUDT2P50583 147 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 ZNF84P51523 738 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 RIN1Q13671 783 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 TBPL2Q6SJ96 375 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 CBLL1Q75N03 491 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 ZNF786Q8N393 782 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 OR13C2Q8NGS9 318 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 OR51A7Q8NH64 312 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 UBASH3BQ8TF42 649 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 LZICQ8WZA0 190 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 HSH2DQ96JZ2 352 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 SNX18Q96RF0 628 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 TXNIPQ9H3M7 391 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 DUSP13Q9UII6 198 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 FBXO9Q9UK97 447 aaPredicted RBP11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 FBXL3Q9UKT7 428 aa11.65□□□□□ -0.54
CUEDC1-204ENST00000577497 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 CENPBD1B2RD01 187 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 CDC42EP2O14613 210 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 MGRN1O60291 552 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 CCDC22O60826 627 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 ERCC1P07992 297 aaPredicted RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 FAM157CP0CG43 387 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 SAGP10523 405 aaPredicted RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 ZNF26P17031 533 aaPredicted RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 APEX1P27695 318 aaKnown RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 RPS23P62266 143 aaKnown RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 MRPS34P82930 218 aaKnown RBP11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 PRKCDQ05655 676 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 CD47Q08722 323 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 NRN1LQ496H8 165 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 IFI44LQ53G44 452 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 PABPC1L2AQ5JQF8 200 aa11.64□□□□□ -0.55
CUEDC1-204ENST00000577497 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms