RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC38A5Q8WUX1 472 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 UPRTQ96BW1 309 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC41A3Q96GZ6 507 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM106BQ9NUM4 274 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM38BQ9NVV0 291 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC17A7Q9P2U7 560 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 ASH2LQ9UBL3 628 aa13.67□□□□□ -0.22
CTDNEP1-211ENST00000575783 A0A1B0GWA3 101 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 A8MXK9 166 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 E9PBE3 544 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 KRT75O95678 551 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 TNFAIP6P98066 277 aaPredicted RBP13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 DPY19L1Q2PZI1 675 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM155Q4W5P6 130 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 LRFN4Q6PJG9 635 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 PXKQ7Z7A4 578 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 SCAIQ8N9R8 606 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM54Q969K7 222 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 C12orf10Q9HB07 376 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 MSL2Q9HCI7 577 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 CYSLTR2Q9NS75 346 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 IL20RAQ9UHF4 553 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
CTDNEP1-211ENST00000575783 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 HNRNPCL2B2RXH8 293 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 PLPP3O14495 311 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 HNRNPCL1O60812 293 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 ERLIN1O75477 346 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 BGLAPP02818 100 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 SERPINB5P36952 375 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 BTG1P62324 171 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 HSF2Q03933 536 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 FAM189A2Q15884 450 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 ALG10BQ5I7T1 473 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 FAM205BPQ63HN1 556 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 Q6YL49 198 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 ZNF101Q8IZC7 436 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 SLC25A40Q8TBP6 338 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 KLF14Q8TD94 323 aaPredicted RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 EPS8L3Q8TE67 593 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 MARS2Q96GW9 593 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 TMEM19Q96HH6 336 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 MOGAT1Q96PD6 335 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 TXLNGYQ9BZA5 131 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 OR2J1Q9GZK6 312 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 MRPL39Q9NYK5 338 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-211ENST00000575783 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 DHHO43323 396 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 ADORA3P0DMS8 318 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 HTR2AP28223 471 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 LIPAP38571 399 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 DSTNP60981 165 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 UFM1P61960 85 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 PDCD4Q53EL6 469 aaKnown RBP13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF620Q6ZNG0 422 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 LRRC18Q8N456 261 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 POU5F2Q8N7G0 328 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 HIPK4Q8NE63 616 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 DNAJA4Q8WW22 397 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 ZNF566Q969W8 418 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 APOPT1Q96IL0 206 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 EPYCQ99645 322 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 NOX4Q9NPH5 578 aa13.64□□□□□ -0.23
CTDNEP1-211ENST00000575783 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 SPAG7O75391 227 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 CLPXO76031 633 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 OR6A2O95222 327 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 CD55P08174 381 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 ADH4P08319 380 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 QDPRP09417 244 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 STOMP27105 288 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 WNT5AP41221 380 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 MVDP53602 400 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 PROK1P58294 105 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 PAX2Q02962 417 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 C2orf68Q2NKX9 166 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 PABPC1L2AQ5JQF8 200 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 ULK3Q6PHR2 472 aa13.63□□□□□ -0.23
CTDNEP1-211ENST00000575783 SLC35D2Q76EJ3 337 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms