RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 HSF1Q00613 529 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 RASGEF1BQ0VAM2 473 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 EXT1Q16394 746 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 SLC25A53Q5H9E4 307 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF679Q8IYX0 411 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OR2M3Q8NG83 312 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 LGALS14Q8TCE9 139 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 RHBDD1Q8TEB9 315 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ABHD1Q96SE0 405 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 GFI1Q99684 422 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 MED29Q9NX70 200 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 H3BSH0 61 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 AIPO00170 330 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 SLC43A1O75387 559 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OPN1LWP04000 364 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 MPLP40238 635 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 FMODQ06828 376 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 MYBPHQ13203 477 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ASB18Q6ZVZ8 466 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 KRT77Q7Z794 578 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 PRSS35Q8N3Z0 413 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ZBTB8BQ8NAP8 495 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OR4K17Q8NGC6 315 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OR5M1Q8NGP8 315 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OR2Y1Q8NGV0 311 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 POC1BQ8TC44 478 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ZC3HAV1LQ96H79 300 aaKnown RBP12.61□□□□□ -0.39
VPS33B-208ENST00000574755 FRMD6Q96NE9 622 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF700Q9H0M5 742 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 PTGES2Q9H7Z7 377 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 B3GALT5Q9Y2C3 310 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 MRPS7Q9Y2R9 242 aaKnown RBP12.61□□□□□ -0.39
VPS33B-208ENST00000574755 B3GALT1Q9Y5Z6 326 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 CHCHD2Q9Y6H1 151 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-208ENST00000574755 V9GY05 133 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 CENPBD1B2RD01 187 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
VPS33B-208ENST00000574755 LANCL1O43813 399 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF254O75437 659 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 MPZL1O95297 269 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 ACP1P24666 158 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 C19orf57Q0VDD7 668 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 CBX3Q13185 183 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
VPS33B-208ENST00000574755 SLC17A1Q14916 467 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 RSBN1Q5VWQ0 802 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-208ENST00000574755 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 STAC2Q6ZMT1 411 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 GLCCI1Q86VQ1 547 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 TMEM106AQ96A25 262 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 IMMP1LQ96LU5 166 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 ARRDC1-AS1Q9H2J1 176 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 GTF2A1LQ9UNN4 478 aa12.6□□□□□ -0.39
VPS33B-208ENST00000574755 TRBV5-5A0A0J9YX44 114 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF432O94892 652 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 UBL3O95164 117 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 WDSUB1Q8N9V3 476 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 OR51A4Q8NGJ6 313 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 OR10AC1Q8NH08 325 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 TRIM63Q969Q1 353 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 C4orf45Q96LM5 186 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ZFP3Q96NJ6 502 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ABHD6Q9BV23 337 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ANKRD10Q9NXR5 420 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-208ENST00000574755 NPIPB13A6NJU9 1138 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 NPIPB4C9JG80 1138 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF823P16415 610 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 FOLR3P41439 243 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 KIR3DL2P43630 455 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 FOXK1P85037 733 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 PITPNAQ00169 270 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 FAM205BPQ63HN1 556 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 OR7E24Q6IFN5 339 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 OPN5Q6U736 354 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 KRT74Q7RTS7 529 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 DUSP18Q8NEJ0 188 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
VPS33B-208ENST00000574755 NSG1A0A0A6YYJ2 146 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 TRABD2BA6NFA1 517 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 M0R296 226 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms