RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MEX3DQ86XN8 651 aaKnown RBP15.51■□□□□ 0.07
CHD3-214ENST00000572579 CLDN22Q8N7P3 220 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 SLC30A7Q8NEW0 376 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 TMEM239Q8WW34 195 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 GTF3AQ92664 365 aaKnown RBP15.51■□□□□ 0.07
CHD3-214ENST00000572579 HDAC2Q92769 488 aaKnown RBP15.51■□□□□ 0.07
CHD3-214ENST00000572579 HPS1Q92902 700 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 SGTBQ96EQ0 304 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 CMTM6Q9NX76 183 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 DUSP13Q9UII6 198 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 A4GNTQ9UNA3 340 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 SPEF1Q9Y4P9 236 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 RP2O75695 350 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 SLC2A10O95528 541 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 IGF2P01344 180 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 ACADSP16219 412 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 APEX1P27695 318 aaKnown RBP15.5■□□□□ 0.07
CHD3-214ENST00000572579 RBM34P42696 430 aaKnown RBP15.5■□□□□ 0.07
CHD3-214ENST00000572579 CHN2P52757 468 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 CDH15P55291 814 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 CCNIQ14094 377 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 LRRC75AQ8NAA5 344 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 NOXO1Q8NFA2 376 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 RASSF5Q8WWW0 418 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 NABP1Q96AH0 204 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 SH3GL1Q99961 368 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 OR51B6Q9H340 312 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 INIPQ9NRY2 104 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 MAN2C1Q9NTJ4 1040 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 SLC7A8Q9UHI5 535 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 BAG5Q9UL15 447 aa15.5■□□□□ 0.07
CHD3-214ENST00000572579 IGLV3-9A0A075B6K5 115 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 FFAR1O14842 300 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 NPPAP01160 153 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 ERCC1P07992 297 aaPredicted RBP15.49■□□□□ 0.07
CHD3-214ENST00000572579 ZNF250P15622 560 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 MAKP20794 623 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 MAGEB1P43366 347 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 CLRN1P58418 232 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 GALK2Q01415 458 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 FMODQ06828 376 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 C10orf128Q5T292 105 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 SLC25A47Q6Q0C1 308 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 SLC16A14Q7RTX9 510 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 LRRC18Q8N456 261 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 LINC01356Q8N9X3 169 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 MS4A5Q9H3V2 200 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 ARMCX1Q9P291 453 aa15.49■□□□□ 0.07
CHD3-214ENST00000572579 A0A1W2PRG6 482 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 FAM220BPB1ANY3 271 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 FAM157AC9JC47 383 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 MGRN1O60291 552 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 YAP1P46937 504 aaKnown RBP15.48■□□□□ 0.07
CHD3-214ENST00000572579 MMEL1Q495T6 779 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 NRN1LQ496H8 165 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 ERICH5Q6P6B1 374 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 TSEN54Q7Z6J9 526 aaKnown RBP15.48■□□□□ 0.07
CHD3-214ENST00000572579 VTCN1Q7Z7D3 282 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 POU5F2Q8N7G0 328 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 CLDND2Q8NHS1 167 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 RDH5Q92781 318 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 POLR2J2Q9GZM3 115 aaKnown RBP15.48■□□□□ 0.07
CHD3-214ENST00000572579 POLR2J3Q9H1A7 115 aaKnown RBP15.48■□□□□ 0.07
CHD3-214ENST00000572579 RNF121Q9H920 327 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 ZNF275Q9NSD4 429 aaPredicted RBP15.48■□□□□ 0.07
CHD3-214ENST00000572579 TAAR3PQ9P1P4 343 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 FBXL3Q9UKT7 428 aa15.48■□□□□ 0.07
CHD3-214ENST00000572579 LOC100509620A0A075B734 347 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 BBIP1A8MTZ0 92 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 J3KTA2 159 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 SNAP29O95721 258 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 SCG5P05408 212 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 WNT5AP41221 380 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 UCP2P55851 309 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 SELENOWP63302 87 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 GUCY1A3Q02108 690 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 LRRC23Q53EV4 343 aaPredicted RBP15.47■□□□□ 0.07
CHD3-214ENST00000572579 PABPC1L2AQ5JQF8 200 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 RGS7BPQ6MZT1 257 aaPredicted RBP15.47■□□□□ 0.07
CHD3-214ENST00000572579 SLC15A3Q8IY34 581 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 MICU2Q8IYU8 434 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 RCN3Q96D15 328 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 TPD52L3Q96J77 140 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 TXNIPQ9H3M7 391 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 NARFLQ9H6Q4 476 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 SIAEQ9HAT2 523 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
CHD3-214ENST00000572579 RHCGQ9UBD6 479 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 TMEFF2Q9UIK5 374 aaPredicted RBP15.47■□□□□ 0.07
CHD3-214ENST00000572579 HIF3AQ9Y2N7 669 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 MED31Q9Y3C7 131 aa15.47■□□□□ 0.07
CHD3-214ENST00000572579 CENPBD1B2RD01 187 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 FARS2O95363 451 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 TROVE2P10155 538 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHD3-214ENST00000572579 THRBP10828 461 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 ZNF26P17031 533 aaPredicted RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 LMO4P61968 165 aa15.46■□□□□ 0.07
CHD3-214ENST00000572579 RPS23P62266 143 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 MRPS34P82930 218 aaKnown RBP15.46■□□□□ 0.07
CHD3-214ENST00000572579 HNRNPA0Q13151 305 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms