RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CDC42P60953 191 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 RPL27P61353 136 aaKnown RBP12.12□□□□□ -0.47
RPAIN-209ENST00000571558 MESTQ5EB52 335 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SLC35D2Q76EJ3 337 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 ENTHD1Q8IYW4 607 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 RHOXF1Q8NHV9 184 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 ABHD3Q8WU67 409 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 RASD2Q96D21 266 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 DDOQ99489 341 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 APOL4Q9BPW4 351 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 RNF122Q9H9V4 155 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 TVP23BQ9NYZ1 205 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SERPINI2O75830 405 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF43P17038 809 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 NTF4P34130 210 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 CD47Q08722 323 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 MAD2L1BPQ15013 274 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 RNPS1Q15287 305 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 LAIR2Q6ISS4 152 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 CASP12Q6UXS9 341 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 NPEPL1Q8NDH3 523 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SLC38A2Q96QD8 506 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TRIB1Q96RU8 372 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 Q9H521 79 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 MED29Q9NX70 200 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GALNT8Q9NY28 637 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 UBAP1Q9NZ09 502 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GRHPRQ9UBQ7 328 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 FLVCR1Q9Y5Y0 555 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 HSPE1-MOB4S4R3N1 261 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 WBP4O75554 376 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 FCGR2AP12318 317 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 ACADSP16219 412 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 KRR1Q13601 381 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 C1DQ13901 141 aaKnown RBP12.11□□□□□ -0.47
RPAIN-209ENST00000571558 MELKQ14680 651 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SNAPC1Q16533 368 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SLC25A30Q5SVS4 291 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 FAM205BPQ63HN1 556 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 THAP5Q7Z6K1 395 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TCEANCQ8N8B7 351 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SLC37A3Q8NCC5 494 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM163Q8TC26 289 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 APH1BQ8WW43 257 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 WNT2BQ93097 391 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 CNBD2Q96M20 576 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 TEX12Q9BXU0 123 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 PRRG3Q9BZD7 231 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GSX2Q9BZM3 304 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 NMNAT2Q9BZQ4 307 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 IMPAD1Q9NX62 359 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 GPR52Q9Y2T5 361 aa12.11□□□□□ -0.47
RPAIN-209ENST00000571558 OR6C68A6NDL8 312 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TRIM64A6NGJ6 449 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 A6NIZ1 184 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 RIIAD1A6NNX1 92 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 RNF212BA8MTL3 300 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF724A8MTY0 619 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 TMCC2O75069 709 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF432O94892 652 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
RPAIN-209ENST00000571558 BCL10O95999 233 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 IFNA2P01563 188 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 NOS3P29474 1203 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 ACVR1BP36896 505 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 BIDP55957 195 aa12.1□□□□□ -0.47
RPAIN-209ENST00000571558 RAP1BP61224 184 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms