RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CSNK1A1P48729 337 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 BPIFB3P59826 476 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 TNFAIP6P98066 277 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 HOXC5Q00444 222 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 CASP8Q14790 479 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 SMU1Q2TAY7 513 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 LIN52Q52LA3 116 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 OXLD1Q5BKU9 147 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 COX20Q5RI15 118 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 GPR157Q5UAW9 335 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 ANXA8L1Q5VT79 327 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 TMEM53Q6P2H8 277 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 CCBE1Q6UXH8 406 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZNF572Q7Z3I7 529 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 NET1Q7Z628 596 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZNF101Q8IZC7 436 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 SLC25A40Q8TBP6 338 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 KLF14Q8TD94 323 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 SSMEM1Q8WWF3 244 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 IFT81Q8WYA0 676 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 SLC38A4Q969I6 547 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 TMEM54Q969K7 222 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 SLC41A3Q96GZ6 507 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 ARHGDIGQ99819 225 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 LRMDAQ9H2I8 198 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 C16orf95Q9H693 158 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 NANOGQ9H9S0 305 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 MSL2Q9HCI7 577 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 CYSLTR2Q9NS75 346 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 TMEM38BQ9NVV0 291 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 NECAP2Q9NVZ3 263 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 KLHL14Q9P2G3 628 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 PSMC3IPQ9P2W1 217 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZDHHC8Q9ULC8 765 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 PYCARDQ9ULZ3 195 aa8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-202ENST00000570380 TRAV36DV7A0A075B6V5 113 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 IQCMA0A1B0GVH7 501 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 TNFRSF13BO14836 293 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 DHHO43323 396 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 PTHP01270 115 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 CCNOP22674 350 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 LIPAP38571 399 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 MDH2P40926 338 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 WNT5AP41221 380 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 CCT5P48643 541 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 FGF12P61328 243 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 EMX2Q04743 252 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 RNF220Q5VTB9 566 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 MBNL2Q5VZF2 373 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 LRFN4Q6PJG9 635 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 C5orf46Q6UWT4 87 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 FITM2Q8N6M3 262 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 RBM15BQ8NDT2 890 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 VPS37AQ8NEZ2 397 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 OR4K5Q8NGD3 323 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 TBC1D15Q8TC07 691 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 TUBGCP3Q96CW5 907 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 THOC1Q96FV9 657 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 OR2J1Q9GZK6 312 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 ASIC5Q9NY37 505 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 GLTPQ9NZD2 209 aa8.7□□□□□ -1.02
CTDNEP1-202ENST00000570380 SERPINI2O75830 405 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 FARS2O95363 451 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 BGLAPP02818 100 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 MMP7P09237 267 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 FUT4P22083 530 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 APLNRP35414 380 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 BIDP55957 195 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 GNB2P62879 340 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 PLP2Q04941 152 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 PUDPQ08623 228 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 CDK5R2Q13319 367 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 LARS2Q15031 903 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SLC36A2Q495M3 483 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SPANXN4Q5MJ08 99 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SLC16A14Q7RTX9 510 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 PXKQ7Z7A4 578 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 DPPA2Q7Z7J5 298 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 MUC20Q8N307 709 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SCAIQ8N9R8 606 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SGCDQ92629 289 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 ANP32BQ92688 251 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SAMD8Q96LT4 415 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 WWC2-AS2Q96NR7 200 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 MOGAT1Q96PD6 335 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 NUDT16L1Q9BRJ7 211 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 SPATA9Q9BWV2 254 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 C12orf10Q9HB07 376 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 NOP53Q9NZM5 478 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 CGGBP1Q9UFW8 167 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 RYR2Q92736 4967 aa8.69□□□□□ -1.02
CTDNEP1-202ENST00000570380 DYNC2H1Q8NCM8 4307 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-202ENST00000570380 ZNF816-ZNF321PA0A0X1KG74 233 aa8.68□□□□□ -1.02
CTDNEP1-202ENST00000570380 CCDC154A6NI56 674 aa8.68□□□□□ -1.02
CTDNEP1-202ENST00000570380 LRRN3E7EW58 273 aa8.68□□□□□ -1.02
CTDNEP1-202ENST00000570380 TMEM178BH3BS89 294 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms