RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CCDC121Q6ZUS5 278 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ASRGL1Q7L266 308 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 HDDC2Q7Z4H3 204 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 MYPOPQ86VE0 399 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ZNF611Q8N823 705 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 PAPD5Q8NDF8 572 aaKnown RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 NINJ1Q92982 152 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ZNF75AQ96N20 296 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ERMAPQ96PL5 475 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 SLC38A2Q96QD8 506 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 LRMDAQ9H2I8 198 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 OR52D1Q9H346 318 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 MMADHCQ9H3L0 296 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 EGLN3Q9H6Z9 239 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 CRNNQ9UBG3 495 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-213ENST00000568158 EDARQ9UNE0 448 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
CNOT1-213ENST00000568158 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 TEX13CA0A0J9YWL9 993 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 SLC22A23A1A5C7 686 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 SOCS2O14508 198 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 FKBP6O75344 327 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 PPP1R3DO95685 299 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 IGLV1-44P01699 117 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 IGFBP1P08833 259 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 CECR9P0C854 216 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 OR8G3PP0DMU2 310 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 IDH3GP51553 393 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 ART1P52961 327 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 NPRL3Q12980 569 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 B3GLCTQ6Y288 498 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 DEPDC4Q8N2C3 294 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 LRRC18Q8N456 261 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 LINC00471Q8N535 108 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 AQP11Q8NBQ7 271 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 SMAP2Q8WU79 429 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 GTPBP3Q969Y2 492 aaKnown RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 ZNF570Q96NI8 536 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 GPX7Q96SL4 187 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-213ENST00000568158 RNF121Q9H920 327 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 UGT2A1Q9Y4X1 527 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 RTTNQ86VV8 2226 aa11.31□□□□□ -0.6
CNOT1-213ENST00000568158 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
CNOT1-213ENST00000568158 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 EBAG9O00559 213 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 XKRYO14609 159 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 TIPRLO75663 272 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 TXNDC12O95881 172 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 IGKV3-15P01624 115 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 SCG5P05408 212 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 SOD3P08294 240 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 DANCRP0C864 163 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 PRKACGP22612 351 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 PAX7P23759 505 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 CALCRP30988 508 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 SDHAP31040 664 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 ARR3P36575 388 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 GIPRP48546 466 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 PTDSS1P48651 473 aaKnown RBP11.3□□□□□ -0.6
CNOT1-213ENST00000568158 RPS6KA3P51812 740 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 CDH11P55287 796 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 NAAAQ02083 359 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 DBPQ10586 325 aaPredicted RBP11.3□□□□□ -0.6
CNOT1-213ENST00000568158 KRR1Q13601 381 aaKnown RBP11.3□□□□□ -0.6
CNOT1-213ENST00000568158 CCNIQ14094 377 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 RAB39AQ14964 217 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 GSG1Q2KHT4 349 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 PGGHGQ32M88 737 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 SLC35F1Q5T1Q4 408 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 FAM205BPQ63HN1 556 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 GPR139Q6DWJ6 353 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 PTCHD4Q6ZW05 846 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 FAM169BQ8N8A8 192 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 FANK1Q8TC84 345 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 FBXW5Q969U6 566 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 CCL19Q99731 98 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 IFT27Q9BW83 186 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 NDEL1Q9GZM8 345 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
CNOT1-213ENST00000568158 MAST4O15021 2626 aa11.29□□□□□ -0.6
CNOT1-213ENST00000568158 AKAP9Q99996 3911 aa11.29□□□□□ -0.6
CNOT1-213ENST00000568158 A0A1W2PPL8 197 aa11.29□□□□□ -0.6
CNOT1-213ENST00000568158 PRSS37A4D1T9 235 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms