RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	FUT8	Q9BYC5	575 aa		11.48	□□□□□ -0.57
SMG1-213	ENST00000567737	DPAGT1	Q9H3H5	408 aa		11.48	□□□□□ -0.57
SMG1-213	ENST00000567737	ACOXL	Q9NUZ1	547 aa		11.48	□□□□□ -0.57
SMG1-213	ENST00000567737	RYR2	Q92736	4967 aa		11.48	□□□□□ -0.57
SMG1-213	ENST00000567737	NUP214	P35658	2090 aa	Predicted RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	IQCM	A0A1B0GVH7	501 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	ZNF726	A6NNF4	738 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	FARS2	O95363	451 aa	Known RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	DBI	P07108	87 aa	Known RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	THRB	P10828	461 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	TNFRSF1A	P19438	455 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	PRPS1L1	P21108	318 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	MPV17	P39210	176 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	ACAA2	P42765	397 aa	Known RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	IER3	P46695	156 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	PLP2	Q04941	152 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	PGS1	Q32NB8	556 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	SPATA46	Q5T0L3	261 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	THEM4	Q5T1C6	240 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	ZNF774	Q6NX45	483 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	ZCCHC23	Q6ZST2	131 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	H1FNT	Q75WM6	255 aa	Predicted RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	KLB	Q86Z14	1044 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	OR4A15	Q8NGL6	344 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	DACT3	Q96B18	629 aa	Predicted RBP	11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	PPP3R2	Q96LZ3	170 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	ARHGDIG	Q99819	225 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	TRIM15	Q9C019	465 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	TMEM165	Q9HC07	324 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	A4GALT	Q9NPC4	353 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	RLIM	Q9NVW2	624 aa		11.47	□□□□□ -0.57
SMG1-213	ENST00000567737	OR2T1	O43869	369 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	HLA-DOB	P13765	273 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	NQO1	P15559	274 aa	Known RBP	11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	RPS4Y1	P22090	263 aa	Known RBP	11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	CCNO	P22674	350 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	GRPR	P30550	384 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	ARRB2	P32121	409 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	APLNR	P35414	380 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	C2orf54	Q08AI8	447 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	SYPL1	Q16563	259 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	SLC36A2	Q495M3	483 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	ZYG11A	Q6WRX3	759 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	TIFAB	Q6ZNK6	161 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	DPPA2	Q7Z7J5	298 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	FITM2	Q8N6M3	262 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	C11orf44	Q8N8P7	122 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	ANKFN1	Q8N957	763 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	TRNT1	Q96Q11	434 aa	Known RBP	11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	SIGLEC11	Q96RL6	698 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	SH3GL3	Q99963	347 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	C1orf50	Q9BV19	199 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	SLC38A1	Q9H2H9	487 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	TOR3A	Q9H497	397 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	MSL2	Q9HCI7	577 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	EIF3K	Q9UBQ5	218 aa	Known RBP	11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	MIOX	Q9UGB7	285 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	DNAJC15	Q9Y5T4	150 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	DOCK11	Q5JSL3	2073 aa		11.46	□□□□□ -0.57
SMG1-213	ENST00000567737	DNAH3	Q8TD57	4116 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	CDHR4	A6H8M9	788 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737		G3V2L1	256 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	C3orf84	H3BNL1	204 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	P2RY10	O00398	339 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	FZD7	O75084	574 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	PEX11A	O75192	247 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	CD33	P20138	364 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	CBL	P22681	906 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	TNFSF4	P23510	183 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	TGFBR2	P37173	567 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	CSNK1A1	P48729	337 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	EGR4	Q05215	589 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	XKR7	Q5GH72	579 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	TMEM255A	Q5JRV8	349 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	FAM69A	Q5T7M9	428 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	MBNL2	Q5VZF2	373 aa	Known RBP	11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	SLC27A4	Q6P1M0	643 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	UNQ6126/PRO20091	Q6UXV3	157 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	LRRC74B	Q6ZQY2	392 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	NLRC3	Q7RTR2	1065 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	LDLRAD3	Q86YD5	345 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	PEX5L	Q8IYB4	626 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	RBM15B	Q8NDT2	890 aa	Known RBP	11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	ADPRHL1	Q8NDY3	354 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	OR8B3	Q8NGG8	313 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	SLC25A40	Q8TBP6	338 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	KLF14	Q8TD94	323 aa	Predicted RBP	11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	NEIL1	Q96FI4	390 aa	Predicted RBP	11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	TXNDC15	Q96J42	360 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	SAMD8	Q96LT4	415 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	OR8B2	Q96RD0	313 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	MARCO	Q9UEW3	520 aa	Predicted RBP	11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	GIMAP2	Q9UG22	337 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	PPP1R3C	Q9UQK1	317 aa		11.45	□□□□□ -0.58
SMG1-213	ENST00000567737	BTBD17	A6NE02	478 aa		11.44	□□□□□ -0.58
SMG1-213	ENST00000567737	HMGN4	O00479	90 aa		11.44	□□□□□ -0.58
SMG1-213	ENST00000567737	RNASET2	O00584	256 aa	Known RBP	11.44	□□□□□ -0.58
SMG1-213	ENST00000567737	ZSCAN12	O43309	604 aa		11.44	□□□□□ -0.58
SMG1-213	ENST00000567737	NPHS1	O60500	1241 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms