RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SOHLH2Q9NX45 425 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 PIPOXQ9P0Z9 390 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 MGAT4CQ9UBM8 478 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 MTFP1Q9UDX5 166 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 FBXO4Q9UKT5 387 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 NUP50Q9UKX7 468 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 RP1P56715 2156 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 C17orf105B2RV13 164 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 OIP5O43482 229 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 PDGFAP04085 211 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 RAB14P61106 215 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 NKAIN2Q5VXU1 208 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 SLC25A25Q6KCM7 469 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 ANKRD16Q6P6B7 361 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 RFPL4BQ6ZWI9 263 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 TMPRSS12Q86WS5 348 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 MEIOBQ8N635 442 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 DNAAF1Q8NEP3 725 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 ASB17Q8WXJ9 295 aa15.16■□□□□ 0.02
CMTM3-213ENST00000566756 GCDHQ92947 438 aaPredicted RBP15.16■□□□□ 0.02
CMTM3-213ENST00000566756 SRA1Q9HD15 236 aaKnown RBP15.16■□□□□ 0.02
CMTM3-213ENST00000566756 NCOR1O75376 2440 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 PLSCR5A0PG75 271 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 OR2M5A3KFT3 312 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 DCTN6O00399 190 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 YKT6O15498 198 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 RBBP9O75884 186 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 CSF1P09603 554 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 RORAP35398 523 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 RAD52P43351 418 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 MAGEB1P43366 347 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 PPM1FP49593 454 aaPredicted RBP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 DCAF7P61962 342 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 TSPAN5P62079 268 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 RBMS2Q15434 407 aaKnown RBP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 WDR74Q6RFH5 385 aaPredicted RBP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 CBLN3Q6UW01 205 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 ZNF676Q8N7Q3 588 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 PTPMT1Q8WUK0 201 aaPredicted RBP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 ASB13Q8WXK3 278 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 GSX2Q9BZM3 304 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 BEX1Q9HBH7 125 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 IKZF2Q9UKS7 526 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 A0A1W2PQD3 144 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 CDC40O60508 579 aaKnown RBP eCLIP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 AKR7A3O95154 331 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 F13BP05160 661 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 RRASP10301 218 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 TACR3P29371 465 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 DCTDP32321 178 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 CCR4P51679 360 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 CFHR1Q03591 330 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 STPG1Q5TH74 334 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 KMT5CQ86Y97 462 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 GATSQ8NAP1 163 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 OR6N2Q8NGY6 317 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 OTOSQ8NHW6 89 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 SAP25Q8TEE9 199 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 KTI12Q96EK9 354 aaPredicted RBP15.15■□□□□ 0.02
CMTM3-213ENST00000566756 C4orf45Q96LM5 186 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 LANCL2Q9NS86 450 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 KIF25Q9UIL4 384 aa15.15■□□□□ 0.02
CMTM3-213ENST00000566756 ZDBF2Q9HCK1 2354 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 B8ZZF3 427 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 MT-ATP6P00846 226 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 BGLAPP02818 100 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 CD1CP29017 333 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 SOX2P48431 317 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 PSMA6P60900 246 aaKnown RBP15.14■□□□□ 0.01
CMTM3-213ENST00000566756 RPS15P62841 145 aaKnown RBP15.14■□□□□ 0.01
CMTM3-213ENST00000566756 HSD11B2P80365 405 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 SQSTM1Q13501 440 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 PRSS42Q7Z5A4 293 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF563Q8TA94 476 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 PIGKQ92643 395 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 TAAR8Q969N4 342 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 LMF1Q96S06 567 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 SEC22CQ9BRL7 303 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 NXF5Q9H1B4 397 aaKnown RBP15.14■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF346Q9UL40 294 aaKnown RBP15.14■□□□□ 0.01
CMTM3-213ENST00000566756 PCDHGA5Q9Y5G8 931 aa15.14■□□□□ 0.01
CMTM3-213ENST00000566756 TRAV8-7A0A075B6U6 113 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 TRAV36DV7A0A075B6V5 113 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 C4orf47A7E2U8 309 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 H3BMH7 237 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 EIF4E2O60573 245 aaKnown RBP15.13■□□□□ 0.01
CMTM3-213ENST00000566756 RGS11O94810 467 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 ITPKBP27987 946 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 SSTR2P30874 369 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 OPCMLQ14982 345 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 DPY19L4Q7Z388 723 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 RABEPKQ7Z6M1 372 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 PRSS35Q8N3Z0 413 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 OR1F2PQ96R84 312 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 OR8B4Q96RC9 309 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF69Q9UC07 566 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM184BQ9Y519 407 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms