RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ERLIN2O94905 339 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 RCBTB2O95199 551 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 C1orf105O95561 183 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 DCNP07585 359 aaKnown RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 GNAO1P09471 354 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 CELP19835 753 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 HSD17B2P37059 387 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 CDKN2BP42772 138 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 ESRRGP62508 458 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 CACNG7P62955 275 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 OGDHQ02218 1023 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 ZNF92Q03936 586 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 GINS1Q14691 196 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 COX19Q49B96 90 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 PHYHD1Q5SRE7 291 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 PMF1Q6P1K2 205 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 DNAJC24Q6P3W2 148 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 TMEM179Q6ZVK1 233 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 FAM83FQ8NEG4 500 aaPredicted RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 STEAP2Q8NFT2 490 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 OR1L4Q8NGR5 311 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 OR52P1PQ8NH57 321 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 ESR2Q92731 530 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 TMEM54Q969K7 222 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 PLEKHA8Q96JA3 519 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 MRPL37Q9BZE1 423 aaKnown RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 MFFQ9GZY8 342 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 RPF2Q9H7B2 306 aaKnown RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 ZNRD1Q9P1U0 126 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 PSG8Q9UQ74 426 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 RFNGQ9Y644 331 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 ABCC8Q09428 1581 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 IGHV5-10-1A0A0J9YXX1 117 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 MTX2O75431 263 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 MPZL1O95297 269 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 UTS2O95399 124 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 IGHV1-8P0DP01 117 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 PTMSP20962 102 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 NAMPTP43490 491 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 YAP1P46937 504 aaKnown RBP2.17□□□□□ -2.06
PALB2-203ENST00000565038 IFNAR2P48551 515 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 CSNK1A1P48729 337 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 UGT2B15P54855 530 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 ARHGAP19Q14CB8 494 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 PDK3Q15120 406 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 ZSCAN26Q16670 478 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 KCTD21Q4G0X4 260 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 OR2A2Q6IF42 318 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 DUX4L9Q6RFH8 374 aaPredicted RBP2.17□□□□□ -2.06
PALB2-203ENST00000565038 ABHD13Q7L211 337 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 NEGR1Q7Z3B1 354 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 TM4SF18Q96CE8 201 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 NEURL3Q96EH8 262 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 TCEANC2Q96MN5 208 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 TSGA13Q96PP4 275 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 KCTD14Q9BQ13 255 aaPredicted RBP2.17□□□□□ -2.06
PALB2-203ENST00000565038 GORASP2Q9H8Y8 452 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 CLEC4AQ9UMR7 237 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 PIGLQ9Y2B2 252 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 DDX49Q9Y6V7 483 aaKnown RBP2.17□□□□□ -2.06
PALB2-203ENST00000565038 DNMBPQ6XZF7 1577 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 PTPRGP23470 1445 aa2.17□□□□□ -2.06
PALB2-203ENST00000565038 WRNQ14191 1432 aaPredicted RBP eCLIP2.17□□□□□ -2.06
PALB2-203ENST00000565038 IGHV3-74A0A0B4J1X5 117 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 A0A0B4J2A0 478 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SNTNA6NMZ2 147 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SGK1O00141 431 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SLC25A14O95258 325 aaPredicted RBP2.16□□□□□ -2.06
PALB2-203ENST00000565038 BCHEP06276 602 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 C2P06681 752 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 LINC00869P0C866 280 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 HRH1P35367 487 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SERPINB5P36952 375 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 NTM-AS1Q6ZSK4 140 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 WDR86Q86TI4 376 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 LGI3Q8N145 548 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 HSD17B11Q8NBQ5 300 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 OR4S2Q8NH73 311 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 FAM3DQ96BQ1 224 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 FOXC2Q99958 501 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SH3GL3Q99963 347 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 TCHPQ9BT92 498 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 ULBP2Q9BZM5 246 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SPNS1Q9H2V7 528 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 VCX2Q9H322 139 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 ANKRD19PQ9H560 264 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 SHPKQ9UHJ6 478 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 CTNNA3Q9UI47 895 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 TMEM14AQ9Y6G1 99 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 PIKFYVEQ9Y2I7 2098 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 FHAD1B1AJZ9 1412 aa2.16□□□□□ -2.06
PALB2-203ENST00000565038 EIF4G3O43432 1585 aaKnown RBP2.15□□□□□ -2.06
PALB2-203ENST00000565038 C15orf38-AP3S2A0A0A6YYH1 394 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 RPL36A-HNRNPH2H7BZ11 118 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 HAS3O00219 553 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 NDC80O14777 642 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 RAD51BO15315 384 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
PALB2-203ENST00000565038 TSPAN12O95859 305 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms