RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FUNDC1Q8IVP5 155 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 HIPK4Q8NE63 616 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 ELMOD3Q96FG2 381 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 MCHR1Q99705 422 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 ZNF747Q9BV97 191 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 OR51B6Q9H340 312 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 ZNF696Q9H7X3 374 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 NANSQ9NR45 359 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 ZNF229Q9UJW7 825 aa15.88■□□□□ 0.13
NME3-204ENST00000563498 PKD1L1Q8TDX9 2849 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 IQCMA0A1B0GVH7 501 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 TPD52L2O43399 206 aaKnown RBP15.87■□□□□ 0.13
NME3-204ENST00000563498 PRSS23O95084 383 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 QDPRP09417 244 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 DRD4P21917 467 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 AQP1P29972 269 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 UBA52P62987 128 aaKnown RBP15.87■□□□□ 0.13
NME3-204ENST00000563498 HIST3H3Q16695 136 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 EPGNQ6UW88 154 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 RETREG3Q86VR2 466 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 RBM15BQ8NDT2 890 aaKnown RBP15.87■□□□□ 0.13
NME3-204ENST00000563498 SPDL1Q96EA4 605 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 ARHGDIGQ99819 225 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 IKZF5Q9H5V7 419 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 C7orf69Q9H7B7 122 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 DDX28Q9NUL7 540 aaKnown RBP15.87■□□□□ 0.13
NME3-204ENST00000563498 OPN4Q9UHM6 478 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 TRIM33Q9UPN9 1127 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 CACNG2Q9Y698 323 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 USH1CQ9Y6N9 552 aa15.87■□□□□ 0.13
NME3-204ENST00000563498 PPIAL4EA0A075B759 164 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 PPIAL4CA0A0B4J2A2 164 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 EVPLLA8MZ36 301 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 CENPBD1B2RD01 187 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 PPIAL4DF5H284 164 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 ZNF500O60304 480 aaPredicted RBP15.86■□□□□ 0.13
NME3-204ENST00000563498 CH25HO95992 272 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 IGHG1P01857 330 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 MMP7P09237 267 aaPredicted RBP15.86■□□□□ 0.13
NME3-204ENST00000563498 PPIAL4FP0DN26 164 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 ZNF81P51508 661 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 PCBP3P57721 371 aaKnown RBP15.86■□□□□ 0.13
NME3-204ENST00000563498 FOXL1Q12952 345 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 MELKQ14680 651 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 TSTQ16762 297 aaKnown RBP15.86■□□□□ 0.13
NME3-204ENST00000563498 TUSC1Q2TAM9 212 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 PAGE3Q5JUK9 113 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 SHISA2Q6UWI4 295 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 TREML1Q86YW5 311 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 SEPHS2Q99611 448 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 ZNF426Q9BUY5 554 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 PARD6BQ9BYG5 372 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 SLC19A3Q9BZV2 496 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 ANGPT4Q9Y264 503 aa15.86■□□□□ 0.13
NME3-204ENST00000563498 M0R3H8 397 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 TMPRSS2O15393 492 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 LYPD3O95274 346 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 ASAH2BP0C7U1 165 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 HKR1P10072 659 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 APLNRP35414 380 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 ZNF84P51523 738 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 SLC3A1Q07837 685 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 ENTPD8Q5MY95 495 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 TTC33Q6PID6 262 aaPredicted RBP15.85■□□□□ 0.13
NME3-204ENST00000563498 SMYD1Q8NB12 490 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 ICA1LQ8NDH6 482 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 CPEB3Q8NE35 698 aaKnown RBP15.85■□□□□ 0.13
NME3-204ENST00000563498 OR6T1Q8NGN1 323 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 OR1J1Q8NGS3 322 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 GTF3AQ92664 365 aaKnown RBP15.85■□□□□ 0.13
NME3-204ENST00000563498 DVL3Q92997 716 aaPredicted RBP15.85■□□□□ 0.13
NME3-204ENST00000563498 MCHR2Q969V1 340 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 MPP4Q96JB8 637 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 GAL3ST1Q99999 423 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 MRPL13Q9BYD1 178 aaKnown RBP15.85■□□□□ 0.13
NME3-204ENST00000563498 NKIRAS1Q9NYS0 192 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 PCDHGB1Q9Y5G3 927 aa15.85■□□□□ 0.13
NME3-204ENST00000563498 IGHV1-46P01743 117 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 THY1P04216 161 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 HIST1H2ABP04908 130 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 ADH4P08319 380 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 MMP15P51511 669 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 ZNF133P52736 654 aaPredicted RBP15.84■□□□□ 0.13
NME3-204ENST00000563498 CLRN1P58418 232 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 GLO1Q04760 184 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 NPTX1Q15818 432 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 DUSP7Q16829 419 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 UNQ6126/PRO20091Q6UXV3 157 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 RBMS3Q6XE24 437 aaKnown RBP15.84■□□□□ 0.13
NME3-204ENST00000563498 HIST3H2AQ7L7L0 130 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 C1orf174Q8IYL3 243 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 LRRC17Q8N6Y2 441 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 ADAMTS16Q8TE57 1224 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 CCL17Q92583 94 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 HIST1H2ACQ93077 130 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 ZBTB9Q96C00 473 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 CYSLTR2Q9NS75 346 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 CCDC167Q9P0B6 97 aa15.84■□□□□ 0.13
NME3-204ENST00000563498 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.84■□□□□ 0.13
NME3-204ENST00000563498 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms