RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 CNPY1Q3B7I2 92 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 CHMP1BQ7LBR1 199 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 CDC20BQ86Y33 519 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 GLB1L2Q8IW92 636 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 ZNF511Q8NB15 262 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 RNF128Q8TEB7 428 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 SNRNP27Q8WVK2 155 aaKnown RBP12.71□□□□□ -0.37
COMMD4-205ENST00000562310 SPRYD4Q8WW59 207 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-205ENST00000562310 UFD1Q92890 307 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 TBX5Q99593 518 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 EMC6Q9BV81 110 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 NDUFB11Q9NX14 153 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 KLHL9Q9P2J3 617 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
COMMD4-205ENST00000562310 HSPB2A8KAH6 182 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 H3BMQ9 156 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 AQP7O14520 342 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 FCGR2AP12318 317 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 CPEP16870 476 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 ENTPD1P49961 510 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF133P52736 654 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 SRYQ05066 204 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 FMODQ06828 376 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 RASGEF1BQ0VAM2 473 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 CAMK2DQ13557 499 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 TPBGQ13641 420 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 HSPB2Q16082 182 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 C19orf48Q6RUI8 117 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 PLEKHG7Q6ZR37 379 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 SLC16A12Q6ZSM3 486 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 TMEM123Q8N131 208 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 OR6N1Q8NGY5 312 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 OR6N2Q8NGY6 317 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 GATAD2BQ8WXI9 593 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 TMEM54Q969K7 222 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF845Q96IR2 970 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-205ENST00000562310 RNF122Q9H9V4 155 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 PTTG2Q9NZH5 202 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 SPRR3Q9UBC9 169 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 B3GNT3Q9Y2A9 372 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF175Q9Y473 711 aa12.7□□□□□ -0.38
COMMD4-205ENST00000562310 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SLC22A1O15245 554 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SLC43A1O75387 559 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF432O94892 652 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 GAAP10253 952 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF823P16415 610 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SH3BGRP55822 239 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ADAM8P78325 824 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 EGR3Q06889 387 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 DBPQ10586 325 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 GPR50Q13585 617 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SSX1Q16384 188 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 C10orf128Q5T292 105 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SLC25A47Q6Q0C1 308 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 GDPGP1Q6ZNW5 385 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SIAH3Q8IW03 269 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 WDFY1Q8IWB7 410 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 RBMXL3Q8N7X1 1067 aaKnown RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ZIC4Q8N9L1 334 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 OTOSQ8NHW6 89 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SNX33Q8WV41 574 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ROBO4Q8WZ75 1007 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 SARAFQ96BY9 339 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 TIMP4Q99727 224 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 TTYH2Q9BSA4 534 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 PRRG4Q9BZD6 226 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 NAA50Q9GZZ1 169 aaKnown RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 B3GAT2Q9NPZ5 323 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 BABAM2Q9NXR7 383 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 LAMP5Q9UJQ1 280 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
COMMD4-205ENST00000562310 COA3Q9Y2R0 106 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-205ENST00000562310 ZNF407Q9C0G0 2248 aa12.68□□□□□ -0.38
COMMD4-205ENST00000562310 A0A087WV48 116 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms