RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SIRT3Q9NTG7 399 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 CALML5Q9NZT1 146 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 CDHR4A6H8M9 788 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 CPSF4LA6NMK7 179 aaKnown RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 LRG1P02750 347 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 KLKB1P03952 638 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 SRMP19623 302 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 SULT1A1P50225 295 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 RAC1P63000 192 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 CLN3Q13286 438 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 TSTA3Q13630 321 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ARHGAP40Q5TG30 622 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF620Q6ZNG0 422 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 PAQR4Q8N4S7 273 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ACBD4Q8NC06 268 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 OR4K17Q8NGC6 315 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 KLK6Q92876 244 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 F2RL3Q96RI0 385 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 HCAR1Q9BXC0 346 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ETV7Q9Y603 341 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 TMEM202A6NGA9 273 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 PPP1R2P9O14990 202 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF208O43345 1280 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 CHRM4P08173 479 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 OR8G3PP0DMU2 310 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 PGAM2P15259 253 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 RAB1AP62820 205 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SAPCD1Q5SSQ6 148 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 CHST9Q7L1S5 443 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 ETFBKMTQ8IXQ9 262 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 OR1J1Q8NGS3 322 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SMPDL3AQ92484 453 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 GAL3ST3Q96A11 431 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SMIM19Q96E16 107 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SAMD8Q96LT4 415 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 ACTRT3Q9BYD9 372 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SELENOIQ9C0D9 397 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 OR52A5Q9H2C5 316 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 RIMS4Q9H426 269 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-206ENST00000561781 KCNE5Q9UJ90 142 aa16.96■□□□□ 0.31
RAB40C-206ENST00000561781 SLC22A31A6NKX4 558 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF587BE7ETH6 402 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 OGG1O15527 345 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 SNRPCP09234 159 aaKnown RBP16.96■□□□□ 0.3
RAB40C-206ENST00000561781 LINC00614P0C842 121 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 GTF2F2P13984 249 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF25P17030 456 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-206ENST00000561781 MAOAP21397 527 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 MPZP25189 248 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 AARDQ4LEZ3 155 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 MESTQ5EB52 335 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-206ENST00000561781 HEPN1Q6WQI6 88 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 GALNT16Q8N428 558 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 KISS1RQ969F8 398 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-206ENST00000561781 BSCL2Q96G97 398 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-206ENST00000561781 SEC22AQ96IW7 307 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 OR14A2Q96R54 314 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 SYT4Q9H2B2 425 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 RHBGQ9H310 441 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 ANKRD10Q9NXR5 420 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 OR5V1Q9UGF6 321 aa16.96■□□□□ 0.3
RAB40C-206ENST00000561781 C9JQL5 133 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 THBS1P07996 1170 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 HMGA1P17096 107 aaKnown RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 HLA-GP17693 338 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 PTNP21246 168 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 LMNTD1Q8N9Z9 388 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 MAFAQ8NHW3 353 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 SLC25A21Q9BQT8 299 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 ATG101Q9BSB4 218 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 NEUROD4Q9HD90 331 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 POT1Q9NUX5 634 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 NOP16Q9Y3C1 178 aaKnown RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 FLVCR1Q9Y5Y0 555 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 C2orf16Q68DN1 1984 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 OR5H15A6NDH6 313 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 OR5H1A6NKK0 313 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 SLC38A8A6NNN8 435 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 C6P13671 934 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 NDUFV2P19404 249 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 PPP2R1BP30154 601 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 RPS10P46783 165 aaKnown RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 SLC16A1P53985 500 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 PRAMEF17Q5VTA0 474 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 RANBP3LQ86VV4 465 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-206ENST00000561781 BPIFB2Q8N4F0 458 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 OR4K14Q8NGD5 310 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 OR1J2Q8NGS2 313 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 ADAMTS17Q8TE56 1095 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 UBQLN4Q9NRR5 601 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 ADAM18Q9Y3Q7 739 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 V9GY05 133 aa16.95■□□□□ 0.3
RAB40C-206ENST00000561781 A0A1W2PRU2 124 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 CRHP06850 196 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ACTC1P68032 377 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ACTA1P68133 377 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF85Q03923 595 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms