RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 P2RX4Q99571 388 aa2.33□□□□□ -2.04
USP8-211ENST00000560527 TCHPQ9BT92 498 aa2.33□□□□□ -2.04
USP8-211ENST00000560527 PARP12Q9H0J9 701 aaKnown RBP2.33□□□□□ -2.04
USP8-211ENST00000560527 VCXQ9H320 206 aa2.33□□□□□ -2.04
USP8-211ENST00000560527 OR12D3Q9UGF7 316 aa2.33□□□□□ -2.04
USP8-211ENST00000560527 CSDC2Q9Y534 153 aaKnown RBP2.33□□□□□ -2.04
USP8-211ENST00000560527 IGKV2D-24A0A075B6R9 120 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 C11orf94C9JXX5 98 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 H0YHG0 523 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 UBXN8O00124 270 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 ANGPTL7O43827 346 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 CD5LO43866 347 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 MED6O75586 246 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 WISP3O95389 354 aaPredicted RBP2.32□□□□□ -2.04
USP8-211ENST00000560527 TNNI1P19237 187 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 HRH1P35367 487 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 NCBP2P52298 156 aaKnown RBP eCLIP2.32□□□□□ -2.04
USP8-211ENST00000560527 SLC7A9P82251 487 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 LRRC74AQ0VAA2 488 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 CLINT1Q14677 625 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 KHDRBS2Q5VWX1 349 aaKnown RBP2.32□□□□□ -2.04
USP8-211ENST00000560527 CERS6Q6ZMG9 384 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 ZNF493Q6ZR52 646 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 STPG2Q8N412 459 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 OR56B2PQ8NGI1 322 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 OR1S2Q8NGQ3 325 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 OR10R2Q8NGX6 335 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 OR4S2Q8NH73 311 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 AKR7LQ8NHP1 331 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 CXorf40AQ8TE69 158 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 RACGAP1Q9H0H5 632 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 RPP21Q9H633 154 aaKnown RBP2.32□□□□□ -2.04
USP8-211ENST00000560527 PISDQ9UG56 409 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 AKNAQ7Z591 1439 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 DOCK9Q9BZ29 2069 aa2.32□□□□□ -2.04
USP8-211ENST00000560527 HEATR9A2RTY3 570 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 ZNF716A6NP11 495 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 CDC7O00311 574 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 ZNF324O75467 553 aaPredicted RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 EEDO75530 441 aaKnown RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 UTS2O95399 124 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 RAB3DO95716 219 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 FGGP02679 453 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 UQCRFS1P1P0C7P4 283 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 ZNF735P0CB33 412 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 TROVE2P10155 538 aaKnown RBP eCLIP2.31□□□□□ -2.04
USP8-211ENST00000560527 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 CHMLP26374 656 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 PBLDP30039 288 aaPredicted RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 RFX3P48380 749 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 CCNHP51946 323 aaPredicted RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 ACTA1P68133 377 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 IDI1Q13907 227 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 PON3Q15166 354 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 OR52W1Q6IF63 320 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 TEX43Q6ZNM6 134 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 C19orf35Q6ZS72 473 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 Q6ZSR3 168 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 HDDC2Q7Z4H3 204 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 LIX1Q8N485 282 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 EID2Q8N6I1 236 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 HSD17B11Q8NBQ5 300 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 OR7G2Q8NG99 324 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 BMFQ96LC9 184 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 CWH43Q9H720 699 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 RPF2Q9H7B2 306 aaKnown RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 PATZ1Q9HBE1 687 aaKnown RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 NOX3Q9HBY0 568 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 SLC40A1Q9NP59 571 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 INPP5EQ9NRR6 644 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 MN1Q10571 1320 aaPredicted RBP2.31□□□□□ -2.04
USP8-211ENST00000560527 USP47Q96K76 1375 aa2.31□□□□□ -2.04
USP8-211ENST00000560527 IGHV5-51A0A0C4DH38 117 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 FAM47DPA6NHR8 397 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CCDC169A6NNP5 214 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 INS-IGF2F8WCM5 200 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 KMOO15229 486 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 WBP4O75554 376 aaKnown RBP2.3□□□□□ -2.04
USP8-211ENST00000560527 CIB2O75838 187 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 RETP07949 1114 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CALM1P0DP23 149 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CALM2P0DP24 149 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CALM3P0DP25 149 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 FOLR1P15328 257 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 HNRNPH3P31942 346 aaKnown RBP2.3□□□□□ -2.04
USP8-211ENST00000560527 NSG1P42857 185 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CYB561P49447 251 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 ACLYP53396 1101 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 YWHAGP61981 247 aaKnown RBP eCLIP2.3□□□□□ -2.04
USP8-211ENST00000560527 ADARB1P78563 741 aaKnown RBP2.3□□□□□ -2.04
USP8-211ENST00000560527 TCP10Q12799 353 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 ANKRD22Q5VYY1 191 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 DUX4L9Q6RFH8 374 aaPredicted RBP2.3□□□□□ -2.04
USP8-211ENST00000560527 IGFL3Q6UXB1 125 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 ZYG11AQ6WRX3 759 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 FAM92BQ6ZTR7 304 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 CDH26Q8IXH8 852 aa2.3□□□□□ -2.04
USP8-211ENST00000560527 FBXL13Q8NEE6 735 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms