RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 J3QRE1 110 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 AQP7O14520 342 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 CYTIPO60759 359 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 SYNGR4O95473 234 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 CRYABP02511 175 aaKnown RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 SBK2P0C263 348 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZNF182P17025 639 aaPredicted RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 CLDN17P56750 224 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 POU4F2Q12837 409 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 KCNJ8Q15842 424 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 LINC01590Q5TEZ4 76 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 RNLSQ5VYX0 342 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 CHMP1BQ7LBR1 199 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZBTB46Q86UZ6 589 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZIC4Q8N9L1 334 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 OR6K6Q8NGW6 343 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 FAR1Q8WVX9 515 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 PNPLA2Q96AD5 504 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZMYND19Q96E35 227 aaPredicted RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 ALG12Q9BV10 488 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 MRPL13Q9BYD1 178 aaKnown RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 RERGLQ9H628 205 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ADGRL4Q9HBW9 690 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 TAS2R16Q9NYV7 291 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 LUZP4Q9P127 313 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 TUBD1Q9UJT1 453 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 B9D1Q9UPM9 204 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 CAMK2AQ9UQM7 478 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 SLC16A7O60669 478 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 IGHG1P01857 330 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
USP3-218ENST00000560202 PGA4P0DJD7 388 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 PGA3P0DJD8 388 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 CRABP1P29762 137 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 RASGEF1BQ0VAM2 473 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 CAMK2DQ13557 499 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 GGTLC2Q14390 218 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
USP3-218ENST00000560202 CRELD1Q96HD1 420 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 PRDM14Q9GZV8 571 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 AKIP1Q9NQ31 210 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 MCTS1Q9ULC4 181 aaKnown RBP9.98□□□□□ -0.81
USP3-218ENST00000560202 EXOSC1Q9Y3B2 195 aaKnown RBP9.98□□□□□ -0.81
USP3-218ENST00000560202 FLVCR1Q9Y5Y0 555 aa9.98□□□□□ -0.81
USP3-218ENST00000560202 FREM3P0C091 2139 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 INMTO95050 263 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 PTHP01270 115 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 IGHA1P01876 353 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 CTLA4P16410 223 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 MYL12AP19105 171 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ETV1P50549 477 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 CLRN1P58418 232 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ETFDHQ16134 617 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 THEM4Q5T1C6 240 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 CARD17Q5XLA6 110 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 DNM1P34Q6PK57 102 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 PLEKHG7Q6ZR37 379 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 CADM3Q8N126 398 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ACBD7Q8N6N7 88 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 POMGNT2Q8NAT1 580 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
USP3-218ENST00000560202 NOXO1Q8NFA2 376 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 FNDC9Q8TBE3 224 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 RNF128Q8TEB7 428 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ABHD3Q8WU67 409 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 RORBQ92753 470 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 MUL1Q969V5 352 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
USP3-218ENST00000560202 SARAFQ96BY9 339 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 RBP7Q96R05 134 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 CNN2Q99439 309 aaKnown RBP9.97□□□□□ -0.81
USP3-218ENST00000560202 JAM3Q9BX67 310 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 PRRG4Q9BZD6 226 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 RACGAP1Q9H0H5 632 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 ING1Q9UK53 422 aaPredicted RBP9.97□□□□□ -0.81
USP3-218ENST00000560202 UGT2A1Q9Y4X1 527 aa9.97□□□□□ -0.81
USP3-218ENST00000560202 IGKV3D-15A0A087WSY6 115 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 A0A1B0GTH9 108 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 C12orf71A8MTZ7 269 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 ZNF99A8MXY4 864 aaPredicted RBP9.96□□□□□ -0.81
USP3-218ENST00000560202 J3QRK9 145 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 TPD52L2O43399 206 aaKnown RBP9.96□□□□□ -0.81
USP3-218ENST00000560202 AKAP8O43823 692 aaKnown RBP9.96□□□□□ -0.81
USP3-218ENST00000560202 AQP8O94778 261 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 ZNF432O94892 652 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 LCKP06239 509 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 LIMS3P0CW19 117 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 LIMS4P0CW20 117 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 NAA10P41227 235 aaPredicted RBP9.96□□□□□ -0.81
USP3-218ENST00000560202 CENPAP49450 140 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 BLVRAP53004 296 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 FMODQ06828 376 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 DGUOKQ16854 277 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 UBE2UQ5VVX9 321 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 FAM180AQ6UWF9 173 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 LYPD4Q6UWN0 246 aa9.96□□□□□ -0.81
USP3-218ENST00000560202 PLXDC2Q6UX71 529 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms