RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CRISP1P54107 249 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 UCNP55089 124 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 LRRC63Q05C16 580 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 CCDC173Q0VFZ6 552 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ABRAXAS2Q15018 415 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 TRAM2Q15035 370 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 RPEL1Q2QD12 228 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 KLF17Q5JT82 389 aaPredicted RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 TPRG1LQ5T0D9 272 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 UFSP1Q6NVU6 142 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 PRMT9Q6P2P2 845 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 TMPRSS11AQ6ZMR5 421 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ACOT7LQ6ZUV0 252 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 TMEM135Q86UB9 458 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 NRMQ8IXM6 262 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 PIANPQ8IYJ0 282 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 MCOLN2Q8IZK6 566 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 SLC34A3Q8N130 599 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 PDIK1LQ8N165 341 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 FTMTQ8N4E7 242 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 EID2Q8N6I1 236 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 LINC00469Q8N7U9 141 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ACOT4Q8N9L9 421 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 OR2G2Q8NGZ5 317 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 OR4Q3Q8NH05 313 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 OR5K2Q8NHB8 316 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 NUBPLQ8TB37 319 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 SLC7A13Q8TCU3 470 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 TCP10LQ8TDR4 215 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 CXorf40AQ8TE69 158 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 DDI1Q8WTU0 396 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ISOC2Q96AB3 205 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ECHDC3Q96DC8 303 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 CMTM7Q96FZ5 175 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 B3GALT6Q96L58 329 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ZNF317Q96PQ6 595 aaPredicted RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 BBS2Q9BXC9 721 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ELOVL4Q9GZR5 314 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 CWH43Q9H720 699 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 KIR3DX1Q9H7L2 352 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 LY9Q9HBG7 655 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 CD209Q9NNX6 404 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ANAPC11Q9NYG5 84 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 UBAP1Q9NZ09 502 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 ZNF282Q9UDV7 671 aaPredicted RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 UBQLN1Q9UMX0 589 aaKnown RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 YARS2Q9Y2Z4 477 aaKnown RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 CDH10Q9Y6N8 788 aa2.74□□□□□ -1.97
SPG11-218ENST00000559754 V9GYY5 206 aaPredicted RBP2.74□□□□□ -1.97
SPG11-218ENST00000559754 UBN2Q6ZU65 1347 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC22A20A6NK97 555 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 RPL37AP8A6NKH3 93 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ZNF487B1APH4 448 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 RFXANKO14593 260 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 XRCC2O43543 280 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 MGRN1O60291 552 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC19A2O60779 497 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 CLDN11O75508 207 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 GJB5O95377 273 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC2A10O95528 541 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 CLIC3O95833 236 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 S100A6P06703 90 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 KRT16P08779 473 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 TACSTD2P09758 323 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 BGNP21810 368 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC2A5P22732 501 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 IGHV1-2P23083 117 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 IL32P24001 234 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 GCKP35557 465 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC26A3P40879 764 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 NBL1P41271 181 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 UGT2B15P54855 530 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 BIDP55957 195 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ATP5J2P56134 94 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ERVPABLB-1P60509 514 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 UBE2MP61081 183 aaKnown RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 RPS15AP62244 130 aaKnown RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 CSNK1G2P78368 415 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 NSUN5P1Q3KNT7 163 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 VAX1Q5SQQ9 334 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 MARCH8Q5T0T0 291 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 LEMD1Q68G75 181 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 OR5M10Q6IEU7 315 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 C11orf71Q6IPW1 123 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ANKRD26P1Q6NSI1 321 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 DNM1P46Q6ZS02 220 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 TRMT10CQ7L0Y3 403 aaKnown RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 OR2W3Q7Z3T1 314 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 LHFPL3Q86UP9 236 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SLC26A11Q86WA9 606 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 PPP1R27Q86WC6 154 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 C17orf82Q86X59 251 aaPredicted RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 LRRC8AQ8IWT6 810 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SYS1Q8N2H4 156 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 TRAM1L1Q8N609 369 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 OR2A12Q8NGT7 310 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 MRAPQ8TCY5 172 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 FGF11Q92914 225 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 NEIL2Q969S2 332 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms