RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OPN1SWP03999 348 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 QDPRP09417 244 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 CCL2P13500 99 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TEKQ02763 1124 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TBC1D28Q2M2D7 210 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 SLC36A2Q495M3 483 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 AGKQ53H12 422 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 RUNDC3AQ59EK9 446 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 FAHD2BQ6P2I3 314 aaPredicted RBP11.16□□□□□ -0.62
TPM1-220ENST00000559556 TTC33Q6PID6 262 aaPredicted RBP11.16□□□□□ -0.62
TPM1-220ENST00000559556 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 OR4D11Q8NGI4 311 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 C11orf40Q8WZ69 217 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 FAHD2AQ96GK7 314 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 OR51B6Q9H340 312 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TMBIM4Q9HC24 238 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 SLC7A7Q9UM01 511 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 PRKDCP78527 4128 aaKnown RBP11.16□□□□□ -0.62
TPM1-220ENST00000559556 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 A0A0G2JMP0 313 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 A0A0X1KG70 313 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 CENPBD1B2RD01 187 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 CLDN25C9JDP6 229 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 TRIM77I1YAP6 450 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 CDC14BO60729 498 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 MPZL1O95297 269 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 IGHV3-13P01766 116 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 IGHG1P01857 330 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 LCKP06239 509 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 MMP7P09237 267 aaPredicted RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 RAD52P43351 418 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 ZNF133P52736 654 aaPredicted RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 UCP2P55851 309 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 CYP51A1Q16850 503 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 AVPI1Q5T686 147 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 SLC16A14Q7RTX9 510 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 NANOGNBQ7Z5D8 188 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 RBM15BQ8NDT2 890 aaKnown RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 OR4M2Q8NGB6 313 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 OR1J2Q8NGS2 313 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 MPP4Q96JB8 637 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 ZNF347Q96SE7 839 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 MRPL13Q9BYD1 178 aaKnown RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 RNF121Q9H920 327 aa11.15□□□□□ -0.62
TPM1-220ENST00000559556 MEPEQ9NQ76 525 aaPredicted RBP11.15□□□□□ -0.62
TPM1-220ENST00000559556 IQCMA0A1B0GVH7 501 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 J3QLI3 93 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 M0QX08 132 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 KPNA4O00629 521 aaPredicted RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 DYNC1I1O14576 645 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 PLPP2O43688 288 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 MGRN1O60291 552 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 BCL10O95999 233 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 MT-ND5P03915 603 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 CD247P20963 164 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 LIMS1P48059 325 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 ZNF84P51523 738 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 CLRN1P58418 232 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 MVKQ03426 396 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 PLP2Q04941 152 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 FAM209AQ5JX71 171 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 C10orf128Q5T292 105 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 USP51Q70EK9 711 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 HDDC2Q7Z4H3 204 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 DHDDSQ86SQ9 333 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 PATL1Q86TB9 770 aaKnown RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 DPP10Q8N608 796 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 VANGL1Q8TAA9 524 aaPredicted RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 GCDHQ92947 438 aaPredicted RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 MCHR2Q969V1 340 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 PRSS27Q9BQR3 290 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 SUCNR1Q9BXA5 334 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 LRMDAQ9H2I8 198 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 SAP30LQ9HAJ7 183 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 LEF1Q9UJU2 399 aaPredicted RBP11.14□□□□□ -0.63
TPM1-220ENST00000559556 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
TPM1-220ENST00000559556 WIPF1O43516 503 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 FSHBP01225 129 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 HIST1H2ABP04908 130 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 UMPSP11172 480 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 EGR1P18146 543 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 GATA3P23771 443 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 APLNRP35414 380 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms