RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZBTB8AQ96BR9 441 aa11.41□□□□□ -0.58
SHMT2-229ENST00000557348 ALG12Q9BV10 488 aa11.41□□□□□ -0.58
SHMT2-229ENST00000557348 TXNIPQ9H3M7 391 aa11.41□□□□□ -0.58
SHMT2-229ENST00000557348 SLC23A1Q9UHI7 598 aa11.41□□□□□ -0.58
SHMT2-229ENST00000557348 MAB21L2Q9Y586 359 aa11.41□□□□□ -0.58
SHMT2-229ENST00000557348 ARPC4-TTLL3A0A0A6YYG9 625 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 OR6C68A6NDL8 312 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 GMFGO60234 142 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 GDF9O60383 454 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 ZNF354AO60765 605 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 HOXB1P14653 301 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 TCN2P20062 427 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 GRPRP30550 384 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 DAP3P51398 398 aaKnown RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 CNIH2Q6PI25 160 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 POMZP3Q6PJE2 187 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 C16orf47Q6ZP98 133 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 SLC16A9Q7RTY1 509 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 RPS19BP1Q86WX3 136 aaKnown RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 FADS6Q8N9I5 356 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 OR6K6Q8NGW6 343 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 SLC25A36Q96CQ1 311 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 RASD2Q96D21 266 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 ZMYND19Q96E35 227 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 IP6K3Q96PC2 410 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 TSPAN32Q96QS1 320 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 ALKBH4Q9NXW9 302 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 TAS2R5Q9NYW4 299 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 MED11Q9P086 117 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 FARSAQ9Y285 508 aaKnown RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
SHMT2-229ENST00000557348 CHCHD2Q9Y6H1 151 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-229ENST00000557348 ANKRD61A6NGH8 418 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 FTCDNL1E5RQL4 147 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 TRIM77I1YAP6 450 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 I3L521 148 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PLPP3O14495 311 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PEX14O75381 377 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 F13BP05160 661 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 GYPBP06028 91 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 MRPL3P09001 348 aaKnown RBP11.4□□□□□ -0.59
SHMT2-229ENST00000557348 TACSTD2P09758 323 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 CLUP10909 449 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 ZP3P21754 424 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 RBMS1P29558 406 aaKnown RBP11.4□□□□□ -0.59
SHMT2-229ENST00000557348 CRABP1P29762 137 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PTGDSP41222 190 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 MLF1P58340 268 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PUDPQ08623 228 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 AANATQ16613 207 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PLPPR5Q32ZL2 321 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PLA1AQ53H76 456 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 DNM1P34Q6PK57 102 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 H1FNTQ75WM6 255 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-229ENST00000557348 TMEM156Q8N614 296 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PRSS33Q8NF86 280 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 OR2M3Q8NG83 312 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 OR10Z1Q8NGY1 313 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PAQR8Q8TEZ7 354 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 CT55Q8WUE5 264 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 SNX33Q8WV41 574 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 THAP4Q8WY91 577 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 PMEPA1Q969W9 287 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 UPRTQ96BW1 309 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 NXPE2Q96DL1 559 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 MESP1Q9BRJ9 268 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 ANGPTL4Q9BY76 406 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 GSX2Q9BZM3 304 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 SPRY4Q9C004 299 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 DPAGT1Q9H3H5 408 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 GALNT9Q9HCQ5 603 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 FANCFQ9NPI8 374 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 ZC4H2Q9NQZ6 224 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 HPF1Q9NWY4 346 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 NLKQ9UBE8 527 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.59
SHMT2-229ENST00000557348 ZC3H12DA2A288 527 aaKnown RBP11.39□□□□□ -0.59
SHMT2-229ENST00000557348 GABRPO00591 440 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 FABP7O15540 132 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 GPRIN2O60269 458 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 PRAF2O60831 178 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 LALBAP00709 142 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 CDKN2AP42771 156 aaKnown RBP11.39□□□□□ -0.59
SHMT2-229ENST00000557348 MTNR1BP49286 362 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF85Q03923 595 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 FOXF1Q12946 379 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 IL18Q14116 193 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 DOC2BQ14184 412 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 CSRP2Q16527 193 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 GXYLT1Q4G148 440 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 MESTQ5EB52 335 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 EEF1A1P5Q5VTE0 462 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 SLC22A10Q63ZE4 541 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 C22orf42Q6IC83 251 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 JMJD6Q6NYC1 403 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-229ENST00000557348 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
SHMT2-229ENST00000557348 HEATR5AQ86XA9 2040 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms