RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PLPP3O14495 311 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 UBDO15205 165 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PPIHO43447 177 aaKnown RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 FMO6PO60774 539 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 SERPINB7O75635 380 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 HPRP00739 348 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PTHP01270 115 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 OR8G3PP0DMU2 310 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 HLA-DOBP13765 273 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 NQO1P15559 274 aaKnown RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 ZNF250P15622 560 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 HOXB9P17482 250 aaPredicted RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 HTR2AP28223 471 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 CRYBB2P43320 205 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 ALDH3B1P43353 468 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 GIPRP48546 466 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PTDSS1P48651 473 aaKnown RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 CSNK1A1P48729 337 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 SEC24CP53992 1094 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 SLC18A1P54219 525 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 ACTG1P63261 375 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 HOXC5Q00444 222 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PIGFQ07326 219 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 ZP4Q12836 540 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PMS2P3Q13401 168 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 C6orf10Q5SRN2 563 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 LRIF1Q5T3J3 769 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 NXNQ6DKJ4 435 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 RGS7BPQ6MZT1 257 aaPredicted RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 C1QL2Q7Z5L3 287 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 PEG10Q86TG7 708 aaKnown RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 MIER2Q8N344 545 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 C3orf56Q8N813 242 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 OR6N1Q8NGY5 312 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 OR6X1Q8NH79 312 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 ZNF519Q8TB69 540 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 TMEM54Q969K7 222 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 YIPF5Q969M3 257 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 VPS33AQ96AX1 596 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 RAB39BQ96DA2 213 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 TXNDC15Q96J42 360 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 ZNF607Q96SK3 696 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 SYT3Q9BQG1 590 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 EMC6Q9BV81 110 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 SUCNR1Q9BXA5 334 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 HINT3Q9NQE9 182 aaKnown RBP7.4□□□□□ -1.22
VRK1-206ENST00000557222 G6PC2Q9NQR9 355 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 TREM2Q9NZC2 230 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 TGP01266 2768 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 A0A0G2JMP0 313 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 A0A0X1KG70 313 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 A0A1W2PPW3 197 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 NCR1O76036 304 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 SEC14L2O76054 403 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 FARS2O95363 451 aaKnown RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 SNAP29O95721 258 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 MT-ND5P03915 603 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 B4GALT1P15291 398 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 EGR1P18146 543 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 TCN1P20061 433 aaPredicted RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 RAD52P43351 418 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 AQP5P55064 265 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 KLF3P57682 345 aaPredicted RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 NCALDP61601 193 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 CDK6Q00534 326 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 OR1Q1Q15612 314 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 GTDC1Q4AE62 458 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 GLIPR1L2Q4G1C9 344 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 FBLN7Q53RD9 439 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 GCNT6Q5T4J0 391 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 CARD17Q5XLA6 110 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 FAHD2BQ6P2I3 314 aaPredicted RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 TMEM154Q6P9G4 183 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 ZNF613Q6PF04 617 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 LRP11Q86VZ4 500 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 LSRQ86X29 649 aaPredicted RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 CARM1Q86X55 608 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 SLC22A24Q8N4F4 322 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 OR4M2Q8NGB6 313 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 OR1J2Q8NGS2 313 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 OR5J2Q8NH18 312 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 NANPQ8TBE9 248 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 SYNPRQ8TBG9 265 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 SNX33Q8WV41 574 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 C11orf40Q8WZ69 217 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 MAL2Q969L2 176 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 FAHD2AQ96GK7 314 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 PAIP2Q9BPZ3 127 aaKnown RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 RSPO3Q9BXY4 272 aaPredicted RBP7.39□□□□□ -1.23
VRK1-206ENST00000557222 BCL2L14Q9BZR8 327 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 LRMDAQ9H2I8 198 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 TMEM38AQ9H6F2 299 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 ZNF665Q9H7R5 613 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 TCF7L2Q9NQB0 619 aa7.39□□□□□ -1.23
VRK1-206ENST00000557222 MED29Q9NX70 200 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms