RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MIOXQ9UGB7 285 aa10.34□□□□□ -0.75
PSEN1-220ENST00000557037 PPP1R3CQ9UQK1 317 aa10.34□□□□□ -0.75
PSEN1-220ENST00000557037 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
PSEN1-220ENST00000557037 FIS1Q9Y3D6 152 aa10.34□□□□□ -0.75
PSEN1-220ENST00000557037 ZNF879B4DU55 563 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 E9PQ18 207 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
PSEN1-220ENST00000557037 GUSBP08236 651 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 LINC00032P0C843 101 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 NHLRC4P0CG21 123 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-220ENST00000557037 CD28P10747 220 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 MAPK1P28482 360 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 GRPRP30550 384 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-220ENST00000557037 CRHR1P34998 444 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 RPL4P36578 427 aaKnown RBP10.33□□□□□ -0.76
PSEN1-220ENST00000557037 WNT5AP41221 380 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 COPZ1P61923 177 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 PTGR1Q14914 329 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
PSEN1-220ENST00000557037 CLECL1Q8IZS7 167 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 VPS37AQ8NEZ2 397 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 OR2Z1Q8NG97 314 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 FBXO25Q8TCJ0 367 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 STK35Q8TDR2 534 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 SAMD8Q96LT4 415 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 TMEM246Q9BRR3 403 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 ERP44Q9BS26 406 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 DPY30Q9C005 99 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 C1orf198Q9H425 327 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 ATAD3AQ9NVI7 634 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 CLN8Q9UBY8 286 aa10.33□□□□□ -0.76
PSEN1-220ENST00000557037 IQCMA0A1B0GVH7 501 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF726A6NNF4 738 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 FBXO24O75426 580 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 AGR2O95994 175 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 CYB5R3P00387 301 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 PRG2P13727 222 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 MMP9P14780 707 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 TNFRSF1AP19438 455 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 SLC6A2P23975 617 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 APLNRP35414 380 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 LIPAP38571 399 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 RPL3P39023 403 aaKnown RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 ACAA2P42765 397 aaKnown RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 CSNK1A1P48729 337 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 EGR4Q05215 589 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 XKR7Q5GH72 579 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 MBNL2Q5VZF2 373 aaKnown RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 WDR25Q64LD2 544 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 H1FNTQ75WM6 255 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-220ENST00000557037 NLRC3Q7RTR2 1065 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 COQ8BQ96D53 544 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 SLC19A3Q9BZV2 496 aa10.32□□□□□ -0.76
PSEN1-220ENST00000557037 A0A096LPI6 279 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 MS4A18H0YCH9 400 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 LSM1O15116 133 aaKnown RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TIMM8AO60220 97 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 SERPINI2O75830 405 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 PTHP01270 115 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 F13BP05160 661 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 NQO1P15559 274 aaKnown RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 IL7RP16871 459 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 NCF2P19878 526 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TNFSF4P23510 183 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 CPT2P23786 658 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 MMP16P51512 607 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 PLP2Q04941 152 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 COX10Q12887 443 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 SYPL1Q16563 259 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 MS4A18Q3C1V0 323 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 ZMAT1Q5H9K5 638 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 MTX3Q5HYI7 312 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 FAM201AQ5SY85 155 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 LYPD2Q6UXB3 125 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 WDR88Q6ZMY6 472 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 RFPL4BQ6ZWI9 263 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 CREG2Q8IUH2 290 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 RBM15BQ8NDT2 890 aaKnown RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 OR4K5Q8NGD3 323 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF420Q8TAQ5 688 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 MIPOL1Q8TD10 442 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TAAR8Q969N4 342 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 RBMXL1Q96E39 390 aaKnown RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 WDFY2Q96P53 400 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 DUSP26Q9BV47 211 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TUBB1Q9H4B7 451 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TMEM38BQ9NVV0 291 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
PSEN1-220ENST00000557037 TMED5Q9Y3A6 229 aa10.31□□□□□ -0.76
PSEN1-220ENST00000557037 LOC102725191A0A1B0GVB3 256 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 RAD51CO43502 376 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms