RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FAM3DQ96BQ1 224 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 KTI12Q96EK9 354 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 TSPAN32Q96QS1 320 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 TCEAL2Q9H3H9 227 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 PCOLCE2Q9UKZ9 415 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 HRH3Q9Y5N1 445 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 C17orf51A8MQB3 221 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 H3BUI4 141 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 ST6GAL1P15907 406 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ALOX5APP20292 161 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 CSF2RBP32927 897 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 VEGFBP49765 207 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 RPL18Q07020 188 aaKnown RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 ISXQ2M1V0 245 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ELP2Q6IA86 826 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 ZNF627Q7L945 461 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 HSD17B13Q7Z5P4 300 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 KRT77Q7Z794 578 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 PM20D2Q8IYS1 436 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 CLEC1AQ8NC01 280 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 SLC25A28Q96A46 364 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 GPX7Q96SL4 187 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 G6PC3Q9BUM1 346 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 PTDSS2Q9BVG9 487 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 TINAGL1Q9GZM7 467 aaPredicted RBP10.32□□□□□ -0.76
SRP54-213ENST00000556994 WDR13Q9H1Z4 485 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 MMP25Q9NPA2 562 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 TAS2R8Q9NYW2 309 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 HIF3AQ9Y2N7 669 aa10.32□□□□□ -0.76
SRP54-213ENST00000556994 A0A0J9YY10 115 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 C11orf98E9PRG8 122 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 HLA-DQA2P01906 255 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 CSN2P05814 226 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 OR4E1P0C645 316 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 SLC25A1P53007 311 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 ALG11Q2TAA5 492 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 NDUFAF7Q7L592 441 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 GABRG1Q8N1C3 465 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 PXT1Q8NFP0 134 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 OR10K1Q8NGX5 313 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 OR6K3Q8NGY3 331 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 RSC1A1Q92681 617 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
SRP54-213ENST00000556994 SLC38A3Q99624 504 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 TMEM185BQ9H7F4 350 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 IFT46Q9NQC8 304 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 CPNE7Q9UBL6 633 aa10.31□□□□□ -0.76
SRP54-213ENST00000556994 MRTO4Q9UKD2 239 aaKnown RBP10.31□□□□□ -0.76
SRP54-213ENST00000556994 LAMA1P25391 3075 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TDRD6O60522 2096 aaKnown RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 LOC100509620A0A075B734 347 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 RFPL4AA6NLU0 287 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TMEM212A6NML5 194 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 RFPL4AL1F8VTS6 287 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 CCSO14618 274 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TMEM127O75204 238 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ALOX12BO75342 701 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 WNT11O96014 354 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 PLGP00747 810 aaPredicted RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 RPA2P15927 270 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 IL32P24001 234 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ATXN7L3Q14CW9 347 aaPredicted RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 MEP1BQ16820 701 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ASPHD2Q6ICH7 369 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 MED25Q71SY5 747 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ATG4DQ86TL0 474 aaPredicted RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 GALNT16Q8N428 558 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 C12orf45Q8N5I9 185 aaPredicted RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 ST8SIA2Q92186 375 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 FGF14Q92915 247 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 MCHR2Q969V1 340 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 MARC2Q969Z3 335 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 SEC22AQ96IW7 307 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 DGAT2Q96PD7 388 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 MNTQ99583 582 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 OR10A5Q9H207 317 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 IGFLR1Q9H665 355 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ELOVL3Q9HB03 270 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 GLS2Q9UI32 602 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 FARSAQ9Y285 508 aaKnown RBP10.3□□□□□ -0.76
SRP54-213ENST00000556994 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 SNAPC5O75971 98 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 AQP8O94778 261 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 RAB3DO95716 219 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 PNPP00491 289 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 ASAH2BP0C7U1 165 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 HPGDP15428 266 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 NR0B2Q15466 257 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 RAB11BQ15907 218 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 SCGB2B2Q4G0G5 96 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 FAM74A3Q4VXF1 159 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 TMEM240Q5SV17 173 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 C1QL3Q5VWW1 255 aa10.3□□□□□ -0.76
SRP54-213ENST00000556994 WBP2NLQ6ICG8 309 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms