RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 HLA-HP01893 362 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 IFNW1P05000 195 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 B4GALT1P15291 398 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 OR1E2P47887 323 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 PTDSS1P48651 473 aaKnown RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 GZMMP51124 257 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF84P51523 738 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 RPS23P62266 143 aaKnown RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 PLP2Q04941 152 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 DAG1Q14118 895 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CARTPTQ16568 116 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 C11orf71Q6IPW1 123 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 B3GLCTQ6Y288 498 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF627Q7L945 461 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 CPLX4Q7Z7G2 160 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MDP1Q86V88 176 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 MICU2Q8IYU8 434 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 OR10H5Q8NGA6 315 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 HTRA1Q92743 480 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 RCN3Q96D15 328 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 SGTBQ96EQ0 304 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 LRGUKQ96M69 825 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TNFRSF13CQ96RJ3 184 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 FNDC11Q9BVV2 318 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 NSRP1Q9H0G5 558 aaKnown RBP6.36□□□□□ -1.39
SCFD1-222ENST00000556768 LRMDAQ9H2I8 198 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF442Q9H7R0 627 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 RNF121Q9H920 327 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 DYNLRB1Q9NP97 96 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF446Q9NWS9 450 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 TAS2R5Q9NYW4 299 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 ARMCX1Q9P291 453 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 FREM1Q5H8C1 2179 aa6.36□□□□□ -1.39
SCFD1-222ENST00000556768 LOC390937A0A1W2PQ73 354 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SLC22A23A1A5C7 686 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 CENPBD1B2RD01 187 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 FXYD1O00168 92 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF682O95780 498 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 IFNA2P01563 188 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 QDPRP09417 244 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ASAH2BP0C7U1 165 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SAGP10523 405 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-222ENST00000556768 COX4I1P13073 169 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 PDLIM4P50479 330 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 EFNB3Q15768 340 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ADIPOQQ15848 244 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SLC36A2Q495M3 483 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 KRT80Q6KB66 452 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 TMEM53Q6P2H8 277 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 UNQ6126/PRO20091Q6UXV3 157 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 WDR88Q6ZMY6 472 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SPATA21Q7Z572 469 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 CYP4Z1Q86W10 505 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SLC22A24Q8N4F4 322 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 LRRC17Q8N6Y2 441 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF525Q8N782 197 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 OR4D11Q8NGI4 311 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 Q96M66 194 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 RBP7Q96R05 134 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
SCFD1-222ENST00000556768 PIMREGQ9BSJ6 248 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF426Q9BUY5 554 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 NDEL1Q9GZM8 345 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 MS4A5Q9H3V2 200 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 C1orf198Q9H425 327 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 INIPQ9NRY2 104 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 GPR160Q9UJ42 338 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 FAM32AQ9Y421 112 aaKnown RBP6.35□□□□□ -1.39
SCFD1-222ENST00000556768 SVEP1Q4LDE5 3571 aa6.35□□□□□ -1.39
SCFD1-222ENST00000556768 PRR14LQ5THK1 2151 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 IGHV4-30-2A0A087WSY4 118 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 IGHV2OR16-5A0A0B4J2B6 119 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 IQCMA0A1B0GVH7 501 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SH3PXD2BA1X283 911 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 GMNCA6NCL1 334 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 A8MV72 311 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 hCG_2039718K7EN88 272 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 DHHO43323 396 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SHOX2O60902 331 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 OR7A10O76100 309 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SERPINA5P05154 406 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 F13BP05160 661 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 RAB6AP20340 208 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 USF1P22415 310 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 THBS4P35443 961 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 EVX1P49640 407 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 PPOXP50336 477 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 NUDT2P50583 147 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 LIPEQ05469 1076 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 LOXL1Q08397 574 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SNTB2Q13425 540 aaKnown RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 ANKDD1AQ495B1 522 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 NRN1LQ496H8 165 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 IQCCQ4KMZ1 466 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 PHYHD1Q5SRE7 291 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 CGB2Q6NT52 195 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 DNM1P46Q6ZS02 220 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SLC16A14Q7RTX9 510 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms