RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TM4SF19Q96DZ7 209 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 AMDHD1Q96NU7 426 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 APOL4Q9BPW4 351 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CCDC3Q9BQI4 270 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 ZNF556Q9HAH1 456 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 NTN4Q9HB63 628 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CDH20Q9HBT6 801 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 LYRM4Q9HD34 91 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 LHX9Q9NQ69 397 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 TUBG2Q9NRH3 451 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 EXD2Q9NVH0 621 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 HRASLS2Q9NWW9 162 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 SPHK1Q9NYA1 384 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PDP1Q9P0J1 537 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 COPS7AQ9UBW8 275 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 EPHA6Q9UF33 1036 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CA5BQ9Y2D0 317 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 SAMHD1Q9Y3Z3 626 aaKnown RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 ASB4Q9Y574 426 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 HEMK1Q9Y5R4 338 aaPredicted RBP4.58□□□□□ -1.68
SRP54-211ENST00000556445 SLC22A7Q9Y694 548 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 RNF215Q9Y6U7 377 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 PLXND1Q9Y4D7 1925 aa4.58□□□□□ -1.68
SRP54-211ENST00000556445 CENPFP49454 3210 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CEP350Q5VT06 3117 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 GOLGA4Q13439 2230 aaKnown RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 TRAV25A0A0B4J276 109 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 A0A0J9YVX5 310 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 A0A1W2PPK0 400 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SLC22A23A1A5C7 686 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR5K3A6NET4 321 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 PROB1E7EW31 1015 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TNFRSF11BO00300 401 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 DLGAP1O14490 977 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 POLR1CO15160 346 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 SNAP29O95721 258 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OXSR1O95747 527 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 AIFM1O95831 613 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 BCHEP06276 602 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CD63P08962 238 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SMIM10L1P0DMW3 83 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 PRKAR1AP10644 381 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 FOSL2P15408 326 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 EFNA1P20827 205 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 MAGP20916 626 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 IGFBP5P24593 272 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 HOXA6P31267 233 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 RRM2P31350 389 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 RPS5P46782 204 aaKnown RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 CXCL12P48061 93 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CCL11P51671 97 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 FOXG1P55316 489 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 C21orf59P57076 290 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 NUP107P57740 925 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 LINC00205P59089 165 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 GABARAPL2P60520 117 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CXCR4P61073 352 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 RPP38P78345 283 aaKnown RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 BTN3A2P78410 334 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 MRPS15P82914 257 aaKnown RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 MYBPC1Q00872 1141 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 APOFQ13790 326 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 KEAP1Q14145 624 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 MEP1AQ16819 746 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TATDN3Q17R31 274 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ESCO2Q56NI9 601 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TPRG1LQ5T0D9 272 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 KDM4DQ6B0I6 523 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 NIPAL3Q6P499 406 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ZNF793Q6ZN11 406 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ZNF704Q6ZNC4 412 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 RBM44Q6ZP01 1051 aaKnown RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 Q6ZS52 159 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 VN1R4Q7Z5H5 301 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 PLD3Q8IV08 490 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SLC22A18ASQ8N1D0 253 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 LRRC25Q8N386 305 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 ZNF786Q8N393 782 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 LRRC17Q8N6Y2 441 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 FAM86B1Q8N7N1 296 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR4K14Q8NGD5 310 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR5D13Q8NGL4 314 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR10G6Q8NH81 332 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR5AK3PQ8NH89 298 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CCL4L1Q8NHW4 92 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 VANGL1Q8TAA9 524 aaPredicted RBP4.57□□□□□ -1.68
SRP54-211ENST00000556445 FLVCR1-AS1Q8TAF5 88 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ADAMTS16Q8TE57 1224 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SLC37A2Q8TED4 501 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 GIPC3Q8TF64 312 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 TANKQ92844 425 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 MCHR2Q969V1 340 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 CLDN23Q96B33 292 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 SMIM10Q96HG1 83 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 PRRC1Q96M27 445 aa4.57□□□□□ -1.68
SRP54-211ENST00000556445 OR2A5Q96R48 311 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms