RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZFP57Q9NU63 452 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 IFNA17P01571 189 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 IGHA1P01876 353 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 PMP2P02689 132 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 NME2P22392 152 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR1D4P47884 311 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 CAV2P51636 162 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 EBPQ15125 230 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 H3F3CQ6NXT2 135 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 THSD4Q6ZMP0 1018 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 ADGRG3Q86Y34 549 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAB3CQ96E17 227 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 TAS2R4Q9NYW5 299 aa13.74□□□□□ -0.21
ARHGEF40-207ENST00000556399 HCRTR1O43613 425 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 DUX1O43812 170 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 IL5P05113 134 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR4E1P0C645 316 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ACHEP22303 614 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 C2orf76Q3KRA6 126 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 KIRREL2Q6UWL6 708 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ESX1Q8N693 406 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF160Q9HCG1 818 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 TP53I11O14683 189 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 TXNL1O43396 289 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 LANCL1O43813 399 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 LHX8Q68G74 356 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SHISA6Q6ZSJ9 500 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM160A2Q8N612 972 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 FGGYQ96C11 551 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAB22AQ9UL26 194 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SFTPDP35247 375 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 MANEAQ5SRI9 462 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 CMTM3Q96MX0 182 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SCPEP1Q9HB40 452 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 NDUFB6O95139 128 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 GABRR1P24046 479 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SELENOPP49908 381 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ACSM1Q08AH1 577 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 ACOT7LQ6ZUV0 252 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC38A6Q8IZM9 456 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR5L2Q8NGL0 311 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SPPL3Q8TCT6 385 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 NUDT22Q9BRQ3 303 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR52A1Q9UKL2 312 aa13.73□□□□□ -0.21
ARHGEF40-207ENST00000556399 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 K7EPK0 472 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 OPN1LWP04000 364 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 HOXB3P14651 431 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TUBG1P23258 451 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 POLR2HP52434 150 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 PLA2G7Q13093 441 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 ACTBL2Q562R1 376 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM91Q6ZNR0 172 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC22A24Q8N4F4 322 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR14A16Q8NHC5 309 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SCGB1C1Q8TD33 95 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM59Q9BXS4 323 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TEX101Q9BY14 249 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMED7-TICAM2A0A0A6YYA0 188 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM235A6NFC5 223 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 DIRAS3O95661 229 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 IFNA5P01569 189 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC26A5P58743 744 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 DND1Q8IYX4 353 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR2L13Q8N349 312 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 NKAIN3Q8N8D7 197 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF578Q96N58 590 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMED7Q9Y3B3 224 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 H0Y8X5 98 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 XRCC3O43542 346 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 GALR3O60755 368 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 CEACAM5P06731 702 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 MGMTP16455 207 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SERPINA2P20848 420 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 GUCA2AQ02747 115 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 LCORQ96JN0 433 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 CCDC86Q9H6F5 360 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 FOXJ3Q9UPW0 622 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 POM121BA6NF01 834 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 LIMS1P48059 325 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 DCAF7P61962 342 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 UBE2IP63279 158 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 HLXQ14774 488 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 BCORP1Q8N888 145 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 HHIPL1Q96JK4 782 aa13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 SDHCQ99643 169 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF254O75437 659 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 SNU13P55769 128 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms