RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 C10orf128Q5T292 105 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 OR7E24Q6IFN5 339 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 GID4Q8IVV7 300 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 GLB1L2Q8IW92 636 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 C8orf59Q8N0T1 100 aaPredicted RBP11.03□□□□□ -0.64
ABCD4-223ENST00000555904 GABRG1Q8N1C3 465 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 OR9Q1Q8NGQ5 310 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 TFAP2CQ92754 450 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 KISS1RQ969F8 398 aaPredicted RBP11.03□□□□□ -0.64
ABCD4-223ENST00000555904 Q96MT0 163 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 HDHD5Q9BXW7 423 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 RACGAP1Q9H0H5 632 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 SEC61A2Q9H9S3 476 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
ABCD4-223ENST00000555904 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
ABCD4-223ENST00000555904 ZNF462Q96JM2 2506 aa11.02□□□□□ -0.64
ABCD4-223ENST00000555904 M0R129 80 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 LYZL6O75951 148 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 HLA-DQA2P01906 255 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 CTLA4P16410 223 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 SPI1P17947 270 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 NPR2P20594 1047 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 COX5AP20674 150 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 CD79BP40259 229 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ADARB1P78563 741 aaKnown RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 PHYHD1Q5SRE7 291 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ZNF362Q5T0B9 420 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 LCN1P1Q5VSP4 162 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ZNF691Q5VV52 312 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 MEDAGQ5VYS4 303 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 NXNL2Q5VZ03 156 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ANKRD16Q6P6B7 361 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 LRFN4Q6PJG9 635 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 KLHL24Q6TFL4 600 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 CXorf67Q86X51 503 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 OR6V1Q8N148 313 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 FAM26EQ8N5C1 309 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ITLN2Q8WWU7 325 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 NMD3Q96D46 503 aaKnown RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 TSSK2Q96PF2 358 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 FOXB1Q99853 325 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 OR51V1Q9H2C8 321 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 KCNN2Q9H2S1 579 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 MED20Q9H944 212 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
ABCD4-223ENST00000555904 RASSF1Q9NS23 344 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 CLN6Q9NWW5 311 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 RAB26Q9ULW5 256 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 MOKQ9UQ07 419 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 HSPE1-MOB4S4R3N1 261 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 GTF3C1Q12789 2109 aa11.02□□□□□ -0.65
ABCD4-223ENST00000555904 ARHGAP21Q5T5U3 1957 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 PHF3Q92576 2039 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 NKX2-6A6NCS4 301 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 C16orf97H3BN30 126 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 RAD51DO75771 328 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 CLIC3O95833 236 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 GYPBP06028 91 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 B4GALT1P15291 398 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 PSMB1P20618 241 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 IGHV1-2P23083 117 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 LAP3P28838 519 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 FMO3P31513 532 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 ZNF133P52736 654 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 CDH11P55287 796 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 SNRPGP62308 76 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 APOFQ13790 326 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 SFRP5Q5T4F7 317 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 SLC25A47Q6Q0C1 308 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 ZNF813Q6ZN06 617 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 LINGO2Q7L985 606 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 ZBTB46Q86UZ6 589 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 ENTHD1Q8IYW4 607 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 C17orf78Q8N4C9 275 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 STEAP2Q8NFT2 490 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 OR10H5Q8NGA6 315 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 NANOS1Q8WY41 292 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 RNASE6Q93091 150 aaKnown RBP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 MUS81Q96NY9 551 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 NMNAT2Q9BZQ4 307 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 NELFAQ9H3P2 528 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 TMEM38BQ9NVV0 291 aa11.01□□□□□ -0.65
ABCD4-223ENST00000555904 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.01□□□□□ -0.65
ABCD4-223ENST00000555904 B9D1Q9UPM9 204 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms