RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CCDC36Q8IYA8 594 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 BCAS4Q8TDM0 211 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 NSMAFQ92636 917 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 NABP1Q96AH0 204 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 Q96M85 177 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 CA10Q9NS85 328 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 ACTR3BQ9P1U1 418 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 IL20RAQ9UHF4 553 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 SIGLEC7Q9Y286 467 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 ARFGEF3Q5TH69 2177 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 NF1P21359 2839 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 RTTNQ86VV8 2226 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 UBOX5O94941 541 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 OR8G3PP0DMU2 310 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 ZNF35P13682 527 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 THBS4P35443 961 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 SLC9A3P48764 834 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 SPIBQ01892 262 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 CD47Q08722 323 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 DBPQ10586 325 aaPredicted RBP11.83□□□□□ -0.52
SNX6-203ENST00000555416 TNK1Q13470 666 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 C10orf128Q5T292 105 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 TRPM8Q7Z2W7 1104 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 FAM122BQ7Z309 247 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 ZER1Q7Z7L7 766 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 ZDHHC21Q8IVQ6 265 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 PAQR4Q8N4S7 273 aaPredicted RBP11.83□□□□□ -0.52
SNX6-203ENST00000555416 FBXO17Q96EF6 278 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 C18orf12Q96KH6 178 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 COX4I2Q96KJ9 171 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 FAIMQ9NVQ4 179 aa11.83□□□□□ -0.52
SNX6-203ENST00000555416 CENPBD1B2RD01 187 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 LY6HO94772 140 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 GADD45GO95257 159 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 SCG5P05408 212 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 FABP3P05413 133 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 CD14P08571 375 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 IGFBP1P08833 259 aaPredicted RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 INHBBP09529 407 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 OR4A8P0C604 315 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 ITGA2P17301 1181 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 PAX7P23759 505 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 RRM2P31350 389 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 RPL4P36578 427 aaKnown RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 ETFDHQ16134 617 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 MESTQ5EB52 335 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 RRM2BQ7LG56 351 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 CDK20Q8IZL9 346 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 LRRC18Q8N456 261 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 ARIH2OSQ8N7S6 290 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 RASD2Q96D21 266 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 TRMT61AQ96FX7 289 aaKnown RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
SNX6-203ENST00000555416 KCNS3Q9BQ31 491 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 TMEM5Q9Y2B1 443 aa11.82□□□□□ -0.52
SNX6-203ENST00000555416 TMEM129A0AVI4 362 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 UNC119BA6NIH7 251 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 ACOT8O14734 319 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 GPRIN2O60269 458 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 MGRN1O60291 552 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 UBL3O95164 117 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 RAB36O95755 333 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 CCL2P13500 99 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 FOSL1P15407 271 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 SERPINF1P36955 418 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 ZNF84P51523 738 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 PPP1R8Q12972 351 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 TRIM25Q14258 630 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 TAF11Q15544 211 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 ANKDD1AQ495B1 522 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 OTPQ5XKR4 325 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 LCN8Q6JVE9 175 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 HDDC2Q7Z4H3 204 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 MAPK1IP1LQ8NDC0 245 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 NUP37Q8NFH4 326 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 OR4F15Q8NGB8 312 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 MCUR1Q96AQ8 359 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 CCDC124Q96CT7 223 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 SLC7A6OSQ96CW6 309 aaPredicted RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 FOXN4Q96NZ1 517 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 ALG12Q9BV10 488 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 SMURF2Q9HAU4 748 aa11.81□□□□□ -0.52
SNX6-203ENST00000555416 MOV10Q9HCE1 1003 aaKnown RBP11.81□□□□□ -0.52
SNX6-203ENST00000555416 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 TEX13CA0A0J9YWL9 993 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SLC22A23A1A5C7 686 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 H7C417 338 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SSX4O60224 188 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 NDUFB2O95178 105 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms