RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 JAZF1Q86VZ6 243 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 HIPK1Q86Z02 1210 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 CLDN22Q8N7P3 220 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 WDR31Q8NA23 367 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 AQP11Q8NBQ7 271 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 PLPPR2Q96GM1 343 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 ZNF570Q96NI8 536 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-206ENST00000555046 WACQ9BTA9 647 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 IFT27Q9BW83 186 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 OSBPL10Q9BXB5 764 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 OR52D1Q9H346 318 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 SIAEQ9HAT2 523 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 IL20Q9NYY1 176 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 PDP1Q9P0J1 537 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-206ENST00000555046 KIAA1549Q9HCM3 1950 aa9.28□□□□□ -0.92
TMEM260-206ENST00000555046 A0A096LPE4 126 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-206ENST00000555046 A0A1W2PPZ6 126 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 PRSS37A4D1T9 235 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 DEFB108AA8MXU0 73 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 UBL3O95164 117 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 RENP00797 406 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 CBR1P16152 277 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 CAPZA2P47755 286 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 FOXG1P55316 489 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-206ENST00000555046 PCBD1P61457 104 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 LGALS3BPQ08380 585 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 ATP6AP1Q15904 470 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 SLC36A2Q495M3 483 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 NCMAPQ5T1S8 102 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF770Q6IQ21 691 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-206ENST00000555046 SHQ1Q6PI26 577 aaKnown RBP9.27□□□□□ -0.93
TMEM260-206ENST00000555046 DNM1P34Q6PK57 102 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 C22orf34Q6ZV56 151 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 MEX3DQ86XN8 651 aaKnown RBP9.27□□□□□ -0.93
TMEM260-206ENST00000555046 CDC20BQ86Y33 519 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 ZDHHC13Q8IUH4 622 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 SVOPLQ8N434 492 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 SLC22A24Q8N4F4 322 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 OR5K1Q8NHB7 308 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF519Q8TB69 540 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 TSPAN32Q96QS1 320 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 SNX18Q96RF0 628 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 FEVQ99581 238 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 GPA33Q99795 319 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 ENOPH1Q9UHY7 261 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 RNF115Q9Y4L5 304 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 CDH10Q9Y6N8 788 aa9.27□□□□□ -0.93
TMEM260-206ENST00000555046 KIAA1324LA8MWY0 1029 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 G3V2T6 193 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 M0R1B8 84 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 TMCC2O75069 709 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 KHDRBS3O75525 346 aaKnown RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 TIPRLO75663 272 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CRYAAP02489 173 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CD79AP11912 226 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CD40P25942 277 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF83P51522 516 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 MRPS34P82930 218 aaKnown RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 MYBPC1Q00872 1141 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 PLP2Q04941 152 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CCNIQ14094 377 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 HIKESHIQ53FT3 197 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 PHYHD1Q5SRE7 291 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 ADAM5Q6NVV9 412 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 TMEM53Q6P2H8 277 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 SLC25A47Q6Q0C1 308 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 ZNF620Q6ZNG0 422 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 LINGO2Q7L985 606 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 FAM122BQ7Z309 247 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CDH24Q86UP0 819 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 ATG16L2Q8NAA4 619 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 OR2T33Q8NG76 320 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 OR9Q2Q8NGE9 314 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 TEX47Q8TBZ9 253 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 HDAC2Q92769 488 aaKnown RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 UTP4Q969X6 686 aaKnown RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 SLCO4A1Q96BD0 722 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 CENPNQ96H22 339 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-206ENST00000555046 SAMD8Q96LT4 415 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 Q96M85 177 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 RNF121Q9H920 327 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 FAIMQ9NVQ4 179 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 TMEM38BQ9NVV0 291 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 KIF17Q9P2E2 1029 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 SPEF1Q9Y4P9 236 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 MPDZO75970 2070 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 ALPK2Q86TB3 2170 aa9.26□□□□□ -0.93
TMEM260-206ENST00000555046 PRRC2AP48634 2157 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms