RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ACADSP16219 412 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF14P17017 642 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ATP6V1B2P21281 511 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 NR4A1P22736 598 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PCSK6P29122 969 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 THBS4P35443 961 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 GLRXP35754 106 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 AQP2P41181 271 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PTDSS1P48651 473 aaKnown RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 EVX1P49640 407 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PDLIM4P50479 330 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF84P51523 738 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF133P52736 654 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MS4A2Q01362 244 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PIGFQ07326 219 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 KRTAP1-1Q07627 177 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MELKQ14680 651 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TRAM2Q15035 370 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PGM2L1Q6PCE3 622 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 VHLLQ6RSH7 139 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MYPOPQ86VE0 399 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 SKA3Q8IX90 412 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 RNF113BQ8IZP6 322 aaKnown RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 OFCC1Q8IZS5 231 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 SLC22A24Q8N4F4 322 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 FAM86B1Q8N7N1 296 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MAPK1IP1LQ8NDC0 245 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 C10orf105Q8TEF2 133 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 NEU4Q8WWR8 484 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 GEMIN6Q8WXD5 167 aaKnown RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ASB10Q8WXI3 467 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MCHR2Q969V1 340 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 PYURFQ96I23 114 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TNFRSF13CQ96RJ3 184 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 SEPHS2Q99611 448 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 VRK1Q99986 396 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 FNDC11Q9BVV2 318 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MRPL13Q9BYD1 178 aaKnown RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TRIM15Q9C019 465 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 MMADHCQ9H3L0 296 aaPredicted RBP7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TXNIPQ9H3M7 391 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 C1orf198Q9H425 327 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 NOX3Q9HBY0 568 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 C20orf141Q9NUB4 165 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 TMEM38BQ9NVV0 291 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF224Q9NZL3 707 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 CMAHPQ9Y471 501 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
ACTN1-213ENST00000554508 ABCA2Q9BZC7 2435 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.21e-6■■■□□ 15
ACTN1-213ENST00000554508 A0A096LNT2 108 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 TMEM129A0AVI4 362 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SLC22A23A1A5C7 686 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 hCG_2039718K7EN88 272 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 TRMUO75648 421 aaKnown RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 PTHP01270 115 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SERPINA5P05154 406 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ERCC1P07992 297 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 IFI30P13284 250 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 YAP1P46937 504 aaKnown RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 GIPRP48546 466 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SLC9A3P48764 834 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 RPS23P62266 143 aaKnown RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 GALK2Q01415 458 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 PRKCDQ05655 676 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 TRAP1Q12931 704 aaKnown RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SNTB2Q13425 540 aaKnown RBP7.54□□□□□ -1.2
ACTN1-213ENST00000554508 FLOT2Q14254 428 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 LAPTM4AQ15012 233 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SLC36A2Q495M3 483 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ALG10Q5BKT4 473 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 MTX3Q5HYI7 312 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 C10orf128Q5T292 105 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ARMC4Q5T2S8 1044 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 LCN8Q6JVE9 175 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 CDK20Q8IZL9 346 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF540Q8NDQ6 660 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 NOXO1Q8NFA2 376 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 FNDC8Q8TC99 324 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 HTRA1Q92743 480 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 BPIFA2Q96DR5 249 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 MS4A3Q96HJ5 214 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ZNF347Q96SE7 839 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 DOK1Q99704 481 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 PIMREGQ9BSJ6 248 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 KCNN2Q9H2S1 579 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 ANKRD19PQ9H560 264 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 RNF121Q9H920 327 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SMURF2Q9HAU4 748 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 SLC7A8Q9UHI5 535 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 POMPQ9Y244 141 aa7.54□□□□□ -1.2
ACTN1-213ENST00000554508 LOC390937A0A1W2PQ73 354 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 TCRBV5S2A0A599 114 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 J3KTA2 159 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ACOT8O14734 319 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms