RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GNB2P62879 340 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 PLP2Q04941 152 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 SMU1Q2TAY7 513 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 LIN52Q52LA3 116 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 TTMPQ5BVD1 217 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF774Q6NX45 483 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 NHLRC1Q6VVB1 395 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 DPPA2Q7Z7J5 298 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 CLIP4Q8N3C7 705 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 SLC38A4Q969I6 547 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 ARHGDIGQ99819 225 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 SLC19A3Q9BZV2 496 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 MSL2Q9HCI7 577 aa11.53□□□□□ -0.56
PRPF39-204ENST00000553605 CGGBP1Q9UFW8 167 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-204ENST00000553605 A0A087WUJ7 227 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 GPR37O15354 613 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 IGHV4-59P01825 116 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 CHRNGP07510 517 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 THRBP10828 461 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 CCNOP22674 350 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 CPT2P23786 658 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 CRHR1P34998 444 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 APLNRP35414 380 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 ANXA11P50995 505 aaKnown RBP11.52□□□□□ -0.57
PRPF39-204ENST00000553605 FGF12P61328 243 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 BST1Q10588 318 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 SLC36A2Q495M3 483 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 ZMAT1Q5H9K5 638 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 ANXA8L1Q5VT79 327 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.57
PRPF39-204ENST00000553605 C5orf46Q6UWT4 87 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 WDR88Q6ZMY6 472 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 GDPGP1Q6ZNW5 385 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 SERPINA11Q86U17 422 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 MUC20Q8N307 709 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-204ENST00000553605 SLC25A40Q8TBP6 338 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-204ENST00000553605 SAMD8Q96LT4 415 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 SIGLEC11Q96RL6 698 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.57
PRPF39-204ENST00000553605 TMEM38BQ9NVV0 291 aa11.52□□□□□ -0.57
PRPF39-204ENST00000553605 TRAV36DV7A0A075B6V5 113 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF816-ZNF321PA0A0X1KG74 233 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 A0A1W2PPM1 405 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 RPS2P15880 293 aaKnown RBP11.51□□□□□ -0.57
PRPF39-204ENST00000553605 TNFRSF1AP19438 455 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 CCT5P48643 541 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 EGR3Q06889 387 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 RNF220Q5VTB9 566 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 Q6ZTK2 550 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 SLC16A14Q7RTX9 510 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 KLBQ86Z14 1044 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 RBM15BQ8NDT2 890 aaKnown RBP11.51□□□□□ -0.57
PRPF39-204ENST00000553605 OR4K5Q8NGD3 323 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 AGR3Q8TD06 166 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 MZB1Q8WU39 189 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 TUBGCP3Q96CW5 907 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 SLC41A3Q96GZ6 507 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 PLEKHA8Q96JA3 519 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 FMO2Q99518 471 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 OR2J1Q9GZK6 312 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 A4GALTQ9NPC4 353 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 GLTPQ9NZD2 209 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 EIF3KQ9UBQ5 218 aaKnown RBP11.51□□□□□ -0.57
PRPF39-204ENST00000553605 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF443Q9Y2A4 671 aaPredicted RBP11.51□□□□□ -0.57
PRPF39-204ENST00000553605 DNAH3Q8TD57 4116 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 SERPINI2O75830 405 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 MPIG6BO95866 241 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 IER3P46695 156 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 BIDP55957 195 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 PCBP3P57721 371 aaKnown RBP11.5□□□□□ -0.57
PRPF39-204ENST00000553605 TXNL4AP83876 142 aaKnown RBP11.5□□□□□ -0.57
PRPF39-204ENST00000553605 HOXC5Q00444 222 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 PUDPQ08623 228 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 MAD2L1Q13257 205 aaPredicted RBP11.5□□□□□ -0.57
PRPF39-204ENST00000553605 CDK5R2Q13319 367 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 CASP8Q14790 479 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 MAPK11Q15759 364 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 COX20Q5RI15 118 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 UNQ6126/PRO20091Q6UXV3 157 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 PXKQ7Z7A4 578 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 LRRC34Q8IZ02 419 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 CNPY4Q8N129 248 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 ASPNQ9BXN1 380 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 C12orf10Q9HB07 376 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 KLHL14Q9P2G3 628 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 RPS6KB2Q9UBS0 482 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 MIOXQ9UGB7 285 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms