RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 VAMP5O95183 116 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 POU3F2P20265 443 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 TNFSF10P50591 281 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 DEFB109BQ30KR1 87 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 DMKNQ6E0U4 476 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 NAA11Q9BSU3 229 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 ACOXLQ9NUZ1 547 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 ST6GALNAC2Q9UJ37 374 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
RBFOX1-215ENST00000553186 TRDV1A0A1B0GX56 115 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 SMAD9O15198 467 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 HLA-DQA2P01906 255 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 FGF9P31371 208 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 CARD18P57730 90 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 CAMK2DQ13557 499 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 SLC17A1Q14916 467 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 HBMQ6B0K9 141 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 UBQLNLQ8IYU4 475 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 OTOSQ8NHW6 89 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 RNF166Q96A37 237 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 ADAD1Q96M93 576 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 GNG8Q9UK08 70 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 PSMD9O00233 223 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 ZNF593O00488 134 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 MPZL1O95297 269 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 IGHG1P01857 330 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 SPINK2P20155 84 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 ZNF766Q5HY98 468 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 C22orf42Q6IC83 251 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 DNM1P34Q6PK57 102 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 CREB3L2Q70SY1 520 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 HDDC2Q7Z4H3 204 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 NOXO1Q8NFA2 376 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 SLC26A10Q8NG04 563 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 OR2V1Q8NHB1 315 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 MRPL48Q96GC5 212 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 PGLYRP3Q96LB9 341 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 HDHD5Q9BXW7 423 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 KCNG2Q9UJ96 466 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 LAMP5Q9UJQ1 280 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 ING1Q9UK53 422 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 KCNMB2Q9Y691 235 aa17.42■□□□□ 0.38
RBFOX1-215ENST00000553186 CENPBD1B2RD01 187 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 OGG1O15527 345 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 HLA-DPB1P04440 258 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 CD53P19397 219 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 SIRPAP78324 504 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 PLGLB1Q02325 96 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 FOXC1Q12948 553 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 INSL4Q14641 139 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 HIST3H3Q16695 136 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 MEP1BQ16820 701 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 THEM4Q5T1C6 240 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 ARL9Q6T311 187 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 OR10D3Q8NH80 312 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 RBP7Q96R05 134 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 COQ7Q99807 217 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 MRM2Q9UI43 246 aaKnown RBP17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 TMEM14AQ9Y6G1 99 aa17.41■□□□□ 0.38
RBFOX1-215ENST00000553186 KHDRBS3O75525 346 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CEACAM4O75871 244 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 ABHD16AO95870 558 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 GAAP10253 952 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 LHX2P50458 406 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 GBX2P52951 348 aaPredicted RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 TMEM91Q6ZNR0 172 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 EGFL6Q8IUX8 553 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 OR9K2Q8NGE7 335 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 ZNF385AQ96PM9 386 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 AMELYQ99218 206 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 FRYQ5TBA9 3013 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CXCL13O43927 109 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 GALP22466 123 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 RPS19P39019 145 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CLDN17P56750 224 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CLRN1P58418 232 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 ADAM8P78325 824 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CDK5R1Q15078 307 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 TRILQ7L0X0 811 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 KCTD20Q7Z5Y7 419 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 ZIC4Q8N9L1 334 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 SF3B5Q9BWJ5 86 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CDADC1Q9BWV3 514 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 SLC6A15Q9H2J7 730 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 CCDC59Q9P031 241 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 WASF3Q9UPY6 502 aa17.4■□□□□ 0.38
RBFOX1-215ENST00000553186 GABRPO00591 440 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 INHBBP09529 407 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 EIF1AXP47813 144 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 PPIAP62937 165 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 EGR3Q06889 387 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC3A1Q07837 685 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 PCK2Q16822 640 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 CCDC58Q4VC31 144 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 PLEKHG7Q6ZR37 379 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 TMEM178AQ8NBL3 297 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 THEM6Q8WUY1 208 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 QPCTLQ9NXS2 382 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms