RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 RUSC1-AS1Q66K80 236 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 TMEM53Q6P2H8 277 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 Q6YL49 198 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 NET1Q7Z628 596 aaPredicted RBP10.82□□□□□ -0.68
VPS29-211ENST00000553128 SNX32Q86XE0 403 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 HOMEZQ8IX15 550 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 CNPY4Q8N129 248 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 SPICQ8N5J4 248 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 SLC25A40Q8TBP6 338 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 DACT3Q96B18 629 aaPredicted RBP10.82□□□□□ -0.68
VPS29-211ENST00000553128 TMEM19Q96HH6 336 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 SIGLEC11Q96RL6 698 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 ARHGDIGQ99819 225 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 OR2J1Q9GZK6 312 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 EGLN1Q9GZT9 426 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 TCF7L1Q9HCS4 588 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 ASH2LQ9UBL3 628 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 OR5V1Q9UGF6 321 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 KLHL21Q9UJP4 597 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 GPR45Q9Y5Y3 372 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 PLSCR5A0PG75 271 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 C11orf98E9PRG8 122 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 PLPP3O14495 311 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 MELTFP08582 738 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 MMP7P09237 267 aaPredicted RBP10.81□□□□□ -0.68
VPS29-211ENST00000553128 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 ANXA11P50995 505 aaKnown RBP10.81□□□□□ -0.68
VPS29-211ENST00000553128 CRISP3P54108 245 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 UFM1P61960 85 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 BTG1P62324 171 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 TXNL4AP83876 142 aaKnown RBP10.81□□□□□ -0.68
VPS29-211ENST00000553128 FAM189A2Q15884 450 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 ESCO2Q56NI9 601 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 ALG10BQ5I7T1 473 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 KPRPQ5T749 579 aaPredicted RBP10.81□□□□□ -0.68
VPS29-211ENST00000553128 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 SLC16A14Q7RTX9 510 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 PXKQ7Z7A4 578 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 TRIML2Q8N7C3 387 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 ZNF283Q8N7M2 679 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 SCAIQ8N9R8 606 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 KLF14Q8TD94 323 aaPredicted RBP10.81□□□□□ -0.68
VPS29-211ENST00000553128 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 C12orf10Q9HB07 376 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 RPS6KB2Q9UBS0 482 aa10.81□□□□□ -0.68
VPS29-211ENST00000553128 IGHV2-70DA0A0C4DH43 119 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 CEACAM18A8MTB9 384 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 DHHO43323 396 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 ITM2AO43736 263 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 TGDSO95455 350 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 CD55P08174 381 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 WNT2P09544 360 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 NUDT7P0C024 238 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 CRATP43155 626 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 TNFAIP6P98066 277 aaPredicted RBP10.8□□□□□ -0.68
VPS29-211ENST00000553128 MELKQ14680 651 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 ZNF718Q3SXZ3 478 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 GTDC1Q4AE62 458 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 SAMD5Q5TGI4 173 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 MBNL2Q5VZF2 373 aaKnown RBP10.8□□□□□ -0.68
VPS29-211ENST00000553128 C5orf46Q6UWT4 87 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 RFPL4BQ6ZWI9 263 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 LRRC18Q8N456 261 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 LSMEM1Q8N8F7 131 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 RBM15BQ8NDT2 890 aaKnown RBP10.8□□□□□ -0.68
VPS29-211ENST00000553128 OR1J2Q8NGS2 313 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 APOPT1Q96IL0 206 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 C1orf198Q9H425 327 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 MRPL39Q9NYK5 338 aaKnown RBP10.8□□□□□ -0.68
VPS29-211ENST00000553128 ZNF232Q9UNY5 417 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 COL7A1Q02388 2944 aa10.8□□□□□ -0.68
VPS29-211ENST00000553128 EPPK1P58107 5090 aaKnown RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 LOC100509620A0A075B734 347 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 A0A0G2JPF8 293 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 IQCMA0A1B0GVH7 501 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 HNRNPCL2B2RXH8 293 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 HNRNPCL3B7ZW38 293 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 HNRNPCL1O60812 293 aaKnown RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 SPAG7O75391 227 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 ZNF205O95201 554 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 FARS2O95363 451 aaKnown RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 QDPRP09417 244 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 ALDOCP09972 364 aaKnown RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 HNRNPCL4P0DMR1 293 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 APLNRP35414 380 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 SERPINB5P36952 375 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 CLNS1AP54105 237 aaKnown RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 DSTNP60981 165 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 PDCD1Q15116 288 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 WHAMMP3Q1A5X7 153 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 DPY19L1Q2PZI1 675 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 SLC36A2Q495M3 483 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 PABPC1L2AQ5JQF8 200 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 SLC35D2Q76EJ3 337 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 ZNF781Q8N8C0 355 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 OR6S1Q8NH40 331 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 OR6X1Q8NH79 312 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 RAB40AQ8WXH6 277 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 MAL2Q969L2 176 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms