RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 MT-ATP6P00846 226 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 MMP15P51511 669 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 CDH12P55289 794 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 PLP2Q04941 152 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 BST1Q10588 318 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 FADDQ13158 208 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 SLC9A3R2Q15599 337 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 SLC16A14Q7RTX9 510 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 TAF15Q92804 592 aaKnown RBP eCLIP14.29□□□□□ -0.12
CACNB3-222ENST00000552465 TRIM44Q96DX7 344 aaPredicted RBP14.29□□□□□ -0.12
CACNB3-222ENST00000552465 SLC25A44Q96H78 314 aaPredicted RBP14.29□□□□□ -0.12
CACNB3-222ENST00000552465 RAD21L1Q9H4I0 556 aa14.29□□□□□ -0.12
CACNB3-222ENST00000552465 POLR3KQ9Y2Y1 108 aaPredicted RBP14.29□□□□□ -0.12
CACNB3-222ENST00000552465 ARHGAP32A7KAX9 2087 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 TRAPPC2LH3BP13 241 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 TM9SF1O15321 606 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 QDPRP09417 244 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 RGS8P57771 180 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-222ENST00000552465 NCALDP61601 193 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 NRN1LQ496H8 165 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 TMEM255AQ5JRV8 349 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 LEG1Q6P5S2 330 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 RBM15BQ8NDT2 890 aaKnown RBP14.28□□□□□ -0.12
CACNB3-222ENST00000552465 CPEB3Q8NE35 698 aaKnown RBP14.28□□□□□ -0.12
CACNB3-222ENST00000552465 NFKBIDQ8NI38 313 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 GTF2H4Q92759 462 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 WFDC6Q9BQY6 131 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 TMEM109Q9BVC6 243 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 SPATA5L1Q9BVQ7 753 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 EGLN1Q9GZT9 426 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
CACNB3-222ENST00000552465 SSU72Q9NP77 194 aaKnown RBP14.28□□□□□ -0.12
CACNB3-222ENST00000552465 TAS2R5Q9NYW4 299 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 ZIM2Q9NZV7 527 aa14.28□□□□□ -0.12
CACNB3-222ENST00000552465 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 TRPC5OSA6NMA1 111 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 HDAC3O15379 428 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 IGHMP01871 453 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 ADH4P08319 380 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MMP7P09237 267 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 SBK2P0C263 348 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 PGA4P0DJD7 388 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 PGA3P0DJD8 388 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 ZNF12P17014 697 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MDKP21741 143 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 GCH1P30793 250 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 APLNRP35414 380 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MPV17P39210 176 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 POLR2JP52435 117 aaKnown RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MPP2Q14168 576 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MELKQ14680 651 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 SPRNQ5BIV9 151 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 THEM4Q5T1C6 240 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 SWT1Q5T5J6 900 aaKnown RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 NXNQ6DKJ4 435 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 REEP3Q6NUK4 255 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 LINC00114Q6XXX2 140 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 KRT73Q86Y46 540 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 MARS2Q96GW9 593 aaKnown RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 NPHS2Q9NP85 383 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 SDR39U1Q9NRG7 319 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-222ENST00000552465 INSIG2Q9Y5U4 225 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 NPTNQ9Y639 398 aa14.27□□□□□ -0.13
CACNB3-222ENST00000552465 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 HOXB9P17482 250 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-222ENST00000552465 CCNOP22674 350 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 HSF2Q03933 536 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 SPATA46Q5T0L3 261 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 GCNT6Q5T4J0 391 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 ZNF101Q8IZC7 436 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 OR9I1Q8NGQ6 314 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 IPCEF1Q8WWN9 437 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-222ENST00000552465 MCHR2Q969V1 340 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 DCLRE1CQ96SD1 692 aaKnown RBP14.26□□□□□ -0.13
CACNB3-222ENST00000552465 MRI1Q9BV20 369 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 MS4A7Q9GZW8 240 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-222ENST00000552465 CYSLTR2Q9NS75 346 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 DCAF16Q9NXF7 216 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 ARMCX1Q9P291 453 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 EGFL7Q9UHF1 273 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 MMP24Q9Y5R2 645 aa14.26□□□□□ -0.13
CACNB3-222ENST00000552465 PRORSD1PA6NEY8 169 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 RNF13O43567 381 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 CH25HO95992 272 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 STOMP27105 288 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 LIPAP38571 399 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 WNT5AP41221 380 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 SLC6A9P48067 706 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 CDK6Q00534 326 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 HNRNPA0Q13151 305 aaKnown RBP14.25□□□□□ -0.13
CACNB3-222ENST00000552465 ZNF74Q16587 644 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 HIST3H3Q16695 136 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 PABPC1L2AQ5JQF8 200 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 HHATQ5VTY9 493 aa14.25□□□□□ -0.13
CACNB3-222ENST00000552465 MBNL2Q5VZF2 373 aaKnown RBP14.25□□□□□ -0.13
CACNB3-222ENST00000552465 SLC2A7Q6PXP3 512 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms