RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 PAQR4Q8N4S7 273 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-221ENST00000550914 SMYD1Q8NB12 490 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 OR4M2Q8NGB6 313 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 OR4K5Q8NGD3 323 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 OR6T1Q8NGN1 323 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 ADAMTS16Q8TE57 1224 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 HIST1H2ACQ93077 130 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 FAHD2AQ96GK7 314 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 SEPHS2Q99611 448 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 SH3GL3Q99963 347 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 RBM4Q9BWF3 364 aaKnown RBP10.97□□□□□ -0.65
PTCH1-221ENST00000550914 PCDHAC1Q9H158 963 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 RABEP2Q9H5N1 569 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TMBIM4Q9HC24 238 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 TRIM33Q9UPN9 1127 aa10.97□□□□□ -0.65
PTCH1-221ENST00000550914 IGHV1-69-2A0A0G2JMI3 117 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 IQCMA0A1B0GVH7 501 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 TRAPPC13A5PLN9 417 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 CPSF4LA6NMK7 179 aaKnown RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 SPRY1O43609 319 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 DEAF1O75398 565 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 BCL10O95999 233 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 LCKP06239 509 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 QDPRP09417 244 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 ASAH2BP0C7U1 165 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 FAM157BP0CG42 384 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 GATA3P23771 443 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF84P51523 738 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF133P52736 654 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 NPTX1Q15818 432 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 AGKQ53H12 422 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 PATL1Q86TB9 770 aaKnown RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 PEG10Q86TG7 708 aaKnown RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 DPP10Q8N608 796 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 GPR32P1Q8NGA4 272 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 GCDHQ92947 438 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 EBF4Q9BQW3 602 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 MRPL13Q9BYD1 178 aaKnown RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 RNF121Q9H920 327 aa10.96□□□□□ -0.65
PTCH1-221ENST00000550914 LEF1Q9UJU2 399 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-221ENST00000550914 TRRAPQ9Y4A5 3859 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 CLDN25C9JDP6 229 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 M0QX08 132 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 PLPP2O43688 288 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 CDC14BO60729 498 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 MPZL1O95297 269 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 IGF2P01344 180 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 THY1P04216 161 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 MMP7P09237 267 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-221ENST00000550914 CCL2P13500 99 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 CLRN1P58418 232 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 MELKQ14680 651 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 CYP51A1Q16850 503 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 C10orf128Q5T292 105 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 NANOGNBQ7Z5D8 188 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 LRRC8CQ8TDW0 803 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 RASSF5Q8WWW0 418 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 RAB1CQ92928 201 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 MCHR2Q969V1 340 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 TIMD4Q96H15 378 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 TSPAN32Q96QS1 320 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 DECR2Q9NUI1 292 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 STX18Q9P2W9 335 aaKnown RBP10.95□□□□□ -0.66
PTCH1-221ENST00000550914 SLC7A7Q9UM01 511 aa10.95□□□□□ -0.66
PTCH1-221ENST00000550914 LOC105371242A0A075B767 164 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 AVPP01185 164 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 UMPSP11172 480 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 CD247P20963 164 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 DRD4P21917 467 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 PCGF2P35227 344 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 APLNRP35414 380 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 ERVS71-1P61550 626 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 MRPS34P82930 218 aaKnown RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 MVKQ03426 396 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 HFEQ30201 348 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 INTS11Q5TA45 600 aaKnown RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 USP51Q70EK9 711 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 DHDDSQ86SQ9 333 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 CPEB3Q8NE35 698 aaKnown RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 NOXO1Q8NFA2 376 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms